Yersinia aldovae: AT01_109
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Entry
AT01_109 CDS
T03605
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
yal
Yersinia aldovae
Pathway
yal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT01_109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yal03400
]
AT01_109
Enzymes [BR:
yal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AT01_109
DNA repair and recombination proteins [BR:
yal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AT01_109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJJ64879
LinkDB
All DBs
Position
complement(119704..120309)
Genome browser
AA seq
201 aa
AA seq
DB search
MFYIYGETEINHLKQRDKKMAAAIERLGMITRPLSRDLFSALIRNIIDQQISVKAALTVN
ARLRALLGTVTPMTVAATTVEAIQRCGMTMRKAGYIKGAADAALNGSLDLSSISLLSDDE
VISQLSRLDGVGIWTAEMLLISSLARPDVVSWGDLAIRRGMMNLYHHKTLPRERFERYRR
RYAPYGTTASLYLWALSHETV
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
gtgttttatatctatggtgaaacagaaataaatcatctcaagcagcgagacaagaaaatg
gcggcagcgattgaacggctagggatgataacgcgcccgttatctcgtgacctgttttct
gcgctgataagaaatattattgaccagcaaatctcggtcaaagccgcgctaacggtcaat
gcacgcctgcgagcactactgggcacggtaacaccaatgacggtcgcggcaacaacagtg
gaagctatccagcgttgtggcatgaccatgagaaaggccggttacattaagggggccgct
gatgctgcgcttaatggctcactggatttatcctctatttcactgctatctgatgatgaa
gttattagccagctttcacgccttgatggtgtcggtatctggaccgccgaaatgctgttg
atctcctcactcgcacgacccgatgttgtcagttggggggatttagctatccgccgcggc
atgatgaatttatatcaccacaaaacactgccgcgtgagcgttttgagcgctatcgccgc
cgctatgcgccttacggcaccaccgcatcgctgtatctatgggcgctgtcgcatgaaacc
gtataa
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