Yersinia aldovae: AT01_116
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Entry
AT01_116 CDS
T03605
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
yal
Yersinia aldovae
Pathway
yal02020
Two-component system
yal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AT01_116 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AT01_116 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yal03021
]
AT01_116 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
yal02035
]
AT01_116 (fliA)
Transcription machinery [BR:
yal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AT01_116 (fliA)
Bacterial motility proteins [BR:
yal02035
]
Flagellar system
Flagellar assembly proteins
Stator
AT01_116 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
TFIIE_alpha
UPF0122
UPF0147
Motif
Other DBs
NCBI-ProteinID:
AJJ62516
LinkDB
All DBs
Position
129074..129796
Genome browser
AA seq
240 aa
AA seq
DB search
MSDLYTAEGVMDKNSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREVATAMQKVEQRVGRPATEQEV
AQTLDIELSEYRQILLDTNNSQLFSYDEWREEHGESVEPLLEGHEDANPLQHLLEGNLRQ
RVIDAIEALPDREKMVLTLYYQEELNLKEIGAVLDVGESRVSQLHSQAIKRLRARLNNDS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatctgtataccgccgaaggcgtgatggacaaaaattccctctggcaacgctat
gttcctctggttcgccatgaggcactgcgtttgcaggtacgcctgcccgccagcgtggag
ttggacgatttattgcaggctgggggaattggtctgctgaatgctgtcgagcgctacgat
gctttgcaagggaccgcgtttaccacttatgcggtacagcgtatacggggggcgatgttg
gatgaactgcgtagccgggattgggcaccgcgcagtgtgcgccgtaatgcgcgtgaagtc
gcgacagcgatgcaaaaggttgaacagcgggtagggcgtcctgcgaccgaacaagaagtg
gcgcaaacccttgacatcgagctgtctgagtatcgccagatcctgttggacactaacaat
agccagcttttctcttatgacgaatggcgtgaagagcatggtgaaagtgtcgaacccctg
ctggaagggcacgaggatgccaatccattacaacacttgttggaaggaaatctgcgccag
cgcgtgattgacgcgatcgaggctttaccggaccgcgaaaagatggtgttaacgctgtat
taccaggaagagctgaatctgaaagaaattggagcggtgcttgatgtgggagaatcccgt
gttagccagcttcatagtcaggcgataaaacgcttgcgtgcccgcctgaataacgactct
taa
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