Yersinia aldovae: AT01_1411
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Entry
AT01_1411 CDS
T03605
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
yal
Yersinia aldovae
Pathway
yal03030
DNA replication
yal03430
Mismatch repair
yal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT01_1411 (dnaX)
03430 Mismatch repair
AT01_1411 (dnaX)
03440 Homologous recombination
AT01_1411 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yal03032
]
AT01_1411 (dnaX)
03400 DNA repair and recombination proteins [BR:
yal03400
]
AT01_1411 (dnaX)
Enzymes [BR:
yal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AT01_1411 (dnaX)
DNA replication proteins [BR:
yal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AT01_1411 (dnaX)
DNA repair and recombination proteins [BR:
yal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AT01_1411 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_30
AAA_14
ResIII
AAA_assoc_2
AAA_2
PIF1
nSTAND3
TsaE
AAA_16
AAA_7
EAD10
Mg_chelatase
AAA_19
RCF1-5-like_lid
SKI
AAA_24
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AJJ63247
LinkDB
All DBs
Position
complement(1488756..1490723)
Genome browser
AA seq
655 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLLSGTRGVGKTTIARLLAK
GLNCETGITAAPCGVCANCREIEQGRFVDLIEIDAASRTKVEDTRELLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKAIDV
EQIRALLEKILQAEQITSDARALQLLARAADGSMRDALSLADQAIAMGQGQITTSTVSQM
LGSLDDEQPLAIIEALVSADGAKVMAQVEQAASRGVDWENLLVETLSLLHRIAMVQLLPS
MLDNHYAAIEPRLRELARTLPPVDIQLYYQTLLMGRKELAYAPDRRMGVEMTLLRALAFH
PKAIIAESQIVPVNAPVAITNNTTPAPSRDPKAQLPVSAIPDAPPPRGAAEVNSQLPDAT
AQLLQARTQLLRQSGATTPKKNEPAAPGKARPANSALERLASVTERSQQRLAAKTTEEKK
PAKKEAYRWTAQNQPEAAPEPVTTPKALRSALEHEKTPELSAKLAEESMARDPWAAEIDK
LQIPKLVQQLALNAFKQEIEPGNICLHLRSAQRHLNSPSAQKALSDALSELHGSTVILSV
VEDDNLAERTPLEWRQAIYEEKLAQARQSIIADNNIQTLRRFFDAELDEESIRPV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtccttgcccgtaagtggcgcccccaaacgtttgcagatgtcgttggt
caggaacatgtactgacggcgctggctaatggcctttcgttagggcgaatccatcacgcc
tatttattatccggtacccgcggtgtcggtaagaccactatcgctcgattgttggccaaa
ggcctcaattgtgaaactgggattactgccgcaccatgtggtgtttgtgcgaattgtcgg
gaaattgagcaaggccgttttgtcgatttaatcgagatagacgccgcttcacgaacgaag
gtagaagatacccgtgagctgctggataacgtgcaatatgctccggctcgtggccgcttc
aaagtgtacttgatcgatgaagttcacatgctgtcgcgccatagttttaacgcattattg
aaaacccttgaagagccaccagcccatgtgaagtttttgctggcaacgacggatccacag
aaattaccggttacgatcctttcccgctgtttgcaatttcacctcaaagccattgatgtt
gaacagattcgtgcgctgctcgagaaaattttgcaagctgagcaaatcaccagtgatgcc
cgcgccttacaattactggctcgggctgctgatggcagtatgcgggatgcgctaagtctg
gcggaccaggctattgcgatggggcaggggcaaatcaccacctcgacggtcagccagatg
ctgggttcgttggatgatgaacagccgctggcgattatcgaagcgttggtcagtgccgat
ggcgctaaggttatggcgcaagtagagcaggcggcttcacgcggtgttgactgggaaaat
ttattggtcgaaaccttaagtctgctgcatcgcattgcgatggtgcaattattgccatca
atgcttgataatcattatgccgccattgaaccacgcttacgtgagctggctcgcacattg
ccccccgttgatattcagctctattatcaaacgctgttaatggggcgcaaagagctggct
tatgctccggatcgccgcatgggggttgaaatgaccttattgcgcgcgctggcttttcat
ccgaaggctataattgctgagtcgcagattgtgcctgtgaatgctccggttgcgataacc
aataataccactcccgctccttcgcgtgatccaaaggcacaactaccggtgtcagcgata
ccagatgcacctcctccacggggggcggctgaggtgaatagccagctacccgatgccacc
gcgcaacttcttcaggcgcgcacacagttactgcggcaatcaggggcgaccacaccaaaa
aagaatgagccggcagcgccaggaaaagcgcggccggcaaactcagcgctggagcgtttg
gcttcagtgactgagcgcagtcagcagcgtctggctgccaaaacaacagaagaaaagaaa
ccagcgaaaaaagaagcctatcgttggactgcacagaaccagccggaagctgcgccagag
ccggtaacgacgcctaaagcgttacgttctgcgctggagcatgaaaaaacgccagaattg
tccgcgaagttagctgaagagtctatggcacgagacccgtgggcggcagagattgataag
ttacaaattcctaaattggtgcagcagcttgctctgaatgcatttaaacaagaaatagaa
ccgggtaatatttgtcttcacctgcgttctgctcagcgtcatttaaattcgccgtcagct
caaaaagcgctgagtgatgcgttgagtgaattacatggtagtacggttatactgagcgtc
gtggaagacgataatctggcggaacgtaccccgctggaatggcgacaggctatttatgaa
gaaaaactggcgcaagcgcgtcagtcaattattgcggataataacattcagacactgcgt
cgtttctttgatgcagaactggatgaagagagtatccggccagtttaa
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