Yersinia aldovae: AT01_1499
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Entry
AT01_1499 CDS
T03605
Name
(GenBank) exonuclease SbcC family protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
yal
Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yal03400
]
AT01_1499
DNA repair and recombination proteins [BR:
yal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AT01_1499
Archaeal homologous recombinant proteins
AT01_1499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
cobW
SMC_N
AAA_21
nSTAND3
GTP_EFTU
NTPase_1
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AJJ65148
LinkDB
All DBs
Position
1583151..1586834
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNINSLQGEWKIDFTVEPFLSSGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVSYRAFWSQRRAKNSPEGNLQAPKVELALCES
GKILSDKVRDKLDMIAELTGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTDI
YGRLSEHVFEQHKQAKTHLDALHQRASGIELLNEEQRLALSQEIDTLSQQEQQLSAEQLA
YQNQINWLTHWQQQQRNLLEYQQQQQLIEQEYQQLLPELQRLARSEPAEKLRPLLRECSK
SQQDLQQTQLRITTLTQQQQQLQTRLTPLAQALEHANTARQQQAVKQHEQETLIEQKVAP
LDNLIAQQQHSLAQLATQLQQLRGKEQQGRQQLELNEQQLKQTHRRLQQLAEYSHQYAHH
QHWEKNLPLWREQFRQLQIQQQQSVESEQQLQQQAILLNTLQQQAATLNDQDKQQQIALA
QAASQAASIQQQLSELEQQQPSAQLRQQLDELQQKRSVRQQLASLSPLAQQVQALHDKQQ
QQLANQQQQLKQLEQQLAEKRQLYKQQKQHLMDLETLLERENQIVRLEAERAKLQPGESC
PLCGALDHPAITEYQAIKPSETALRVDKQRQQVERLSTEGSELNAQTQSLQQQLKHLEQE
LQHSNQQLADYQQRWQLLVRPLALTFALNEPVVLANWLEQQEQSEQNCQLKLAEYERLNQ
QHQQAKELLTQAEQQQQKYLQQLALITQRQQDTQQSHQQLLAQHQRQQDELARMRQDFSN
ALVALSLAIPETDQQQNWLAQREEENQRWQQHLQEQQQLALGQKTLETRLEDERRHLQEC
IDQLSVLIQQHQQAETLLQQQNQQRQALFGSTSVAEARQLLRQQQQQIELAQQNAAEALQ
QAQSQLNLLSGELAGLEQQHQQNQQRAITAQAELQQALASSEFDDEAALTAALLSEDERQ
RLQQLKQQLGERQQQANIRQQQASEALEQQLQSCPIGVDQTTELAVLQQQLEQLLAQLKA
NTLRQGELRNQLETDTARRSNQHALFEQIERSQQQYDDWSYLNQLIGSKEGDKFRKFAQG
LTLDHLVYLANNQLSRLHGRYQLQRKTSDALELQVVDTWQADAIRDTRTLSGGESFLVSL
ALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDIALDALDSLNASGKTIGVISHVEAMK
ERIPVQIKVKKVNGLGVSRLDSIFQVK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttaagcctgcggctaaaaaacattaactccctgcaaggtgaatggaagatt
gatttcaccgtcgaaccgtttctcagtagcggtttgttcgccatcaccgggccaacagga
gcgggtaagaccacactgctggatgccatctgcctggcgttgtatcaccaaacgccacgt
ttgaatgtcactcccagccagaatgaactgatgacacgccacaccgctgagtcactggca
gaagttgaatttgaagtgaaaggcgtcagttatcgtgccttctggagccagaggcgcgct
aaaaatagccctgaggggaatcttcaagcacctaaagtcgaactggcgttgtgcgagagc
ggtaaaattctgtccgataaagtgcgcgacaagctggatatgattgcagaactcactggc
ctggactttggccgttttaccaagtccatgatgctatcacaggggcagtttgcagcattc
ctcaatgccgatgccaatgatcgggctgaactactggaagaattaaccggtaccgatatt
tatggtcggctatctgaacacgtatttgagcaacataaacaggcgaagacccatctggat
gcattgcatcagcgagccagtggcattgaactgctcaatgaagaacaacgtttagctttg
agccaagaaatagataccctcagccaacaagaacaacagctcagtgcagagcaactggcg
tatcaaaatcaaataaattggcttactcattggcagcagcagcaaagaaatctactggaa
tatcagcagcaacagcaactcatcgagcaagagtatcaacagctactgcccgaactgcaa
cgattggcccgtagtgaaccggcagaaaaattgcgcccgttactacgcgagtgctcaaaa
agccagcaggatctgcaacagacacaactacgcatcaccacattgacccaacagcagcag
caacttcagactcgcctaacccccttggctcaggcactggaacacgctaataccgcccgc
caacaacaagcggtaaaacagcatgagcaagaaacactgatcgaacaaaaagtggctccg
ctggataaccttattgctcagcaacagcactcactggcacaacttgccacccaattacag
caattgcggggcaaagaacaacaaggtagacaacaacttgaactaaatgagcaacaacta
aaacaaactcaccggcgtctgcaacaactggctgagtacagccaccagtatgcccaccat
caacactgggaaaaaaacctgccgttgtggcgcgaacagttccgccaattgcaaatacag
caacagcaatcggttgaaagcgagcagcaattacagcagcaagccatactactgaataca
ctgcaacaacaagccgcaacactgaatgatcaagataaacagcagcaaatagcattagca
caggcggcctcgcaagcagccagcatccagcagcaattatccgaattagaacagcagcag
ccctcggcccaactgcgccagcaacttgatgaactccaacaaaaacgctcagtccggcaa
caattagcctcgttatcgcctttggcacagcaagtacaggcattgcatgataagcaacag
cagcaattagccaaccagcagcaacaactaaaacaactcgaacaacagctagcggaaaaa
cgtcagttatataaacaacaaaaacagcatctgatggatctggaaaccttgctggaacgc
gagaatcagatagtcagactggaagcggaaagagccaaactgcaaccaggagagtcctgc
ccgctatgtggcgcgctggatcatccagcgattaccgaatatcaggcaataaaaccctct
gaaacagccctgcgcgttgataaacagcgccaacaagttgaacggctatcaaccgaaggc
tcggaactcaatgcccagacacaaagtttgcaacaacagctcaaacatctggaacaagaa
ttacagcacagcaatcagcaattagctgattatcaacagcgctggcaacttctggtgcgc
ccattagcactgacatttgcattaaatgaacccgttgtattagcgaattggctggaacaa
caggaacaatcagaacaaaactgccaactcaaactggcagaatatgaacgactcaatcaa
caacaccagcaagctaaagagcttctgactcaagcagaacaacagcagcaaaaatatctg
caacagttggcattaattactcagcgccagcaggatacccaacaatcccaccaacagtta
cttgcacagcatcaacgccagcaagatgaattggcaagaatgcgccaagatttcagtaac
gcactggttgcattatcgctagcaatacctgaaacagaccagcagcagaattggctggca
cagcgggaagaggaaaaccaacgttggcagcagcacctacaagagcaacagcagcttgct
ctggggcaaaaaactctggaaacacggcttgaggatgagcgtcgccatttacaagaatgt
attgaccagttatctgtgctcattcaacaacatcaacaagctgaaaccctgttacagcag
cagaatcagcaacgtcaggcactgtttggtagcaccagcgttgccgaagcacgccagtta
ttgcgccagcaacagcaacaaatcgagctggcgcagcagaatgcagccgaagccctgcaa
caggcacaatctcaacttaacttgctatcgggtgaactggcgggattagaacaacaacat
caacaaaatcagcaacgcgcaatcaccgcgcaggctgaattacagcaagcactggcaagc
agtgagtttgacgatgaggcggctttaaccgctgcattactgagcgaagatgaaaggcaa
cgtttgcagcaattgaaacaacaattgggtgagcgtcaacagcaagccaatatccgtcag
cagcaagccagtgaagcactggagcaacagttacaatcctgtccaatcggagtcgatcaa
accactgaattagcagtattacagcagcaattggagcaattattggcacaactgaaagcc
aatacactacggcaaggcgaattacgtaaccagctagaaacggatacagctcgccgcagc
aaccagcacgcgctatttgagcaaattgagcgtagccaacagcaatatgatgactggagt
tatctcaatcaattaatcggctccaaagaaggcgataaattccgcaaattcgcgcaaggt
ttgacgctcgaccatctggtctatctggcaaataaccaactcagccgtttacatggccgc
taccagttacagagaaaaaccagtgacgctctggagttacaagtggtggatacctggcag
gcggatgcaatacgcgatacccgcacactttccggtggggaaagttttttggtcagcctg
gcactggcattggcgttatctgatttggtcagccataaaaccagtattgactcactattt
cttgatgaaggcttcggtactctggatgcagaaacgctggatattgccttggatgctctg
gatagtctgaacgcttcaggtaaaactatcggggttattagccatgtggaggcgatgaaa
gagcgaattccggtgcagataaaagttaaaaaggtcaacggattgggagtcagccgttta
gacagtatttttcaggtgaagtag
DBGET
integrated database retrieval system
