Yersinia aldovae: AT01_1582
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Entry
AT01_1582 CDS
T03605
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
yal
Yersinia aldovae
Pathway
yal03030
DNA replication
yal03430
Mismatch repair
yal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT01_1582 (dnaE)
03430 Mismatch repair
AT01_1582 (dnaE)
03440 Homologous recombination
AT01_1582 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yal03032
]
AT01_1582 (dnaE)
03400 DNA repair and recombination proteins [BR:
yal03400
]
AT01_1582 (dnaE)
Enzymes [BR:
yal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AT01_1582 (dnaE)
DNA replication proteins [BR:
yal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AT01_1582 (dnaE)
DNA repair and recombination proteins [BR:
yal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AT01_1582 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
MutS_II
Motif
Other DBs
NCBI-ProteinID:
AJJ61388
LinkDB
All DBs
Position
complement(1683572..1687054)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKIGPLVKRAAALGMPALAITDFTNLCGLVKFYGSAHSA
GIKPIIGADFYVQSEILGDELAHLTVLARNNDGYQNLTLLISEAYQRGYGAAGPIIDRDW
LIKHKEGLILLSGGRMGDVGKFMLRGNQVQVDLCLDFYQEHFPDSYYLELIRTGRPDEEN
YLHAAVALATERGLPVVATNDVRFIDESDFDAHEIRVAIHDGFTLVDPKRPKNYSPQQFM
RDEAQMCELFADIPEALFNSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLVEKSKQGL
EERLELLFPDPEERAQKRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGKNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKTGLEPIDIASIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHECLKPVLEPTYGIILYQEQVMQIAQVLSGYSLGGADMLRRAMGKKNPAEM
AKQRSVFEDGAKEQGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEAPIEAILDARKEGGYFKELFDLCARVDTKKLNRRILEKLVMSGAFDRLGPHRAALMS
SLGEALKAADQHAKAEAIGQADMFGVLADAPEQVEQSYANVPPWQEQIVLDGERETLGLY
LTGHPITQYLKEIERYAGGLRLKDMHPTDRGKMTTAVGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIATGQVSFDDFSGGLKMTARELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRAGTIPVHLYYQREDARARLRFGATWRVTPTD
RLLIDLRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttgtccacctgcgtgttcacagcgattactccatgatcgatgga
ttagccaagattgggcccttggtgaagagagctgctgcattaggtatgcccgctctggcc
attaccgactttaccaacttgtgtggtctggtaaaattctacggtagcgcccacagtgca
gggattaaacccatcattggcgcagatttctatgtgcaaagtgaaattctgggtgatgag
ttggctcacctcaccgtattggcccgtaataatgacggttaccaaaacctcaccttactg
atatccgaagcttatcaacgtggttatggcgctgctggcccgatcattgatcgcgactgg
cttattaagcataaagaagggctgattctgctctccggtggccggatgggggatgtcggc
aagtttatgttgcgtggcaatcaggtgcaggttgacctgtgccttgatttttatcaagag
catttccctgacagctactatttggagttaatccgtaccggtcggccagacgaagagaac
tatcttcatgccgcagtcgcattggcgacggaacgcggcttgccggttgtagccaccaat
gatgtgcgttttatcgatgaatctgactttgacgctcatgagatccgcgttgctattcat
gacggttttacattggtcgatcctaagcgacctaaaaactatagccctcagcagtttatg
cgcgatgaggcgcagatgtgcgagctattcgcggacattcctgaagcgctgttcaacagc
gttgaaatcgccaaacgttgtaacgtgaccattcgccttggggaatacttcttaccacag
ttcccgactggcgatatgagtacggaagattttctggttgagaaatcgaagcaaggtctg
gaagagcgtctggagttgctcttccctgatcctgaagagcgagcacaaaaacggccagag
tatgacgaacggctcgatattgagctaaaggttattaaccagatggggttccccggttac
ttcctgatcgttatggagtttatccagtggtcgaaagataatggtgtaccggtcgggccg
gggcgagggtcaggtgcaggttctctggtggcttacgcgctaaaaattaccgatttggac
ccgctggaatttgacctgctgttcgaacgttttctcaaccccgaacgtgtttcaatgccg
gactttgacgttgacttctgtatggagaaacgcgatctggtgatagaacatgtggccgaa
atgtatggccgcgacgccgtttcccagataattaccttcggtacaatggccgcgaaagcg
gtgatccgcgatgtgggccgtgtgctggggcatccttacggtttcgtcgaccgcatctca
aaattggtgccaccggatccggggatgacgctggagaaggcctttgcggctgaaccgcaa
ctgcctgaaatctatgaggcagacgaagaggtcagggcgcttatcgacatggcgcgtaag
ctggaaggtgtcacacgtaacgccggtaaacacgccggtggggtggttattgcaccgacc
aaaattaccgattttgcaccgctctattgcgatgctgaaggtaaaaacccggttactcag
ttcgataaaaatgatgtggaatatgccggcctggtgaagtttgacttccttggtttgcgc
accttaaccatcattaactgggcgctggagatgatcaatgcccggcgtgccaaaaccggt
ctggaaccgattgatattgcttccattccgctggaagataaaaaaagctttgatatgctg
caacgttcggaaacgacggcggtattccagcttgaatccaggggcatgaaagatttgatc
aaacgcctgaagcctgactgcttcgaggatatgatagcactggtggcgttattccgccca
ggcccactgcaatctgggatggtagataactttattgaccgtaaacatggtcgcgaagca
atctcttacccagatattgaatggcagcatgaatgcctaaaaccagtgctggagccaacc
tatggcatcatcttgtatcaggaacaggtgatgcagattgcacaggttctgtcgggttac
tcactcggtggcgcagatatgttgcgtcgtgcaatgggtaagaaaaacccggctgaaatg
gctaaacagcgctcggtatttgaagatggggcgaaagagcaggggattgacggagaactg
gcgattaagatctttgatctggtggaaaaattcgccggttatggttttaacaaatctcac
tccgccgcttacgctctggtttcctaccaaacgctatggttaaaagcccattatccggct
gaatttatggcagcggttatgactgcggatatggataacaccgataaagtggttggcttg
gtggatgagtgttggcgtatggggctgaaaatactgccgccagacatcaacagcggcttg
tatcatttccatgtaaacgatgagggtgaaattgtttacggcatcggcgcaattaagggc
gtcggtgaagcgccgatcgaggccattctggacgcgcgtaaagagggcggctacttcaaa
gagttatttgatttatgcgctcgcgttgataccaaaaaactgaatcggcgaatcttagaa
aaactggtcatgtcaggtgcctttgaccgcttagggccgcaccgagctgccttgatgagc
tcgctgggcgaagcgctgaaagcagcggatcaacatgctaaggccgaagccattggtcag
gcagatatgtttggcgtattagcggatgcacctgagcaggttgagcaatcttatgctaat
gtgccgccgtggcaagagcagatagttttagacggtgagcgggagacgctggggctgtat
ctgaccggtcatccgattacccaatatctgaaggaaatagaacgttatgccggcgggctg
cgtttaaaagatatgcatccgacggatcggggcaaaatgaccactgcggtggggctggtc
atcgctgcaagggttatggtaacaaaacgtggtaatcgtattggcatttgtacgctggat
gaccgttctggccgtctggaggtgatgctatttaccgatgcgttggaaaaatatcagcat
ttattggaaaaagaccgtatcctgatagccaccgggcaggtcagctttgatgactttagt
ggtggacttaaaatgaccgcccgtgagttaatggacatcagtgaagctcgtgaaaaatat
gcccgtgggcttgctatatcgctgaccgacaggcaaattgatgaccagcttttgaaccgt
ctccgtcagtcgttggaaccccatcgagcggggacgatcccagtgcacctttattaccaa
cgggaagatgctcgcgcccggctgcggtttggagccacatggcgcgtgacgcccaccgat
cgcttattgatagatttgcgaacgttggtaggtaatgagcaggtagaactggaatttgac
taa
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