Yersinia aldovae: AT01_1864
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Entry
AT01_1864 CDS
T03605
Name
(GenBank) RHS repeat-associated core domain protein
Organism
yal
Yersinia aldovae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
PAAR_motif
DUF6531
RHS
Tox-PAAR-like
UPF0257
DUF346
Motif
Other DBs
NCBI-ProteinID:
AJJ64878
LinkDB
All DBs
Position
complement(1980009..1984538)
Genome browser
AA seq
1509 aa
AA seq
DB search
MSIGQGVWTGAGAAGGRSAVRQEVMDQQRGASPPNTNEGGAESFNEQALNFMESEGVNNT
VTAGMGAYAIATGAGAPFAVGLAAGYVGAKAGSYVGEKAGDAIAESLGWKKVATDGDAPA
RMGDFIAHQKKDLGSWGALGGILLGAVAAVAVGALVVATGGAALVVVAAAAAAGGFVGAG
VAVAGAVMGQYGDNKGTILSGSPDVFFEGKPVARVGDPIICSDHPGAPPVIAEGAKTVYA
NGKQIARLGHRTTCDANINSGAATIAETKETAQVFAVKDSRSSALRWVTIVASYLPLPKG
KKGEKPKKSVEAEGCSNNKCTRPGEPVDAATGDFLQVWPMIDIPGLLPLNLTRLYRSSGT
LSGSFGAKWADSWSQHLIIEQDIIRFRNHEGVLLSYDAPQDDDDVQAVNLHEGQYLLYGQ
RSGVLHIFNRQTQQILSFAERQGDSRCLSAISDRFGNQIRFRYSVDQQLSRIEHSVGYAL
ELSYQQQQLTLIELVTAAQRQWLVKCRYDENGLLAECDTFQFTHLYHTYNAAGHMTRWHD
TDKTDAYIHYDQLGRVLSTRTASGHYQDRFSYDDVARCTTYQDAEGGFTRFWYNTDGQVI
REVDPLGREHLTEWAFSNKLSETDALGRTLVFQRNPHSELQQVVTPAGDTYRYDYNGFGQ
ITQSTLPDGKCWQFIYGDNGELCNVVDPQGRRQEYRYGEQGELVRQILPDGIEWRYRYNT
QYQVSEIIAPDGGVTLLNQDIFGRILDTQDPLGQTTRSIYSPQHASPAGSVNHVYLPDGV
EQAIAYDSEKRVAALTDGAGKTTRYEYGGFDLLVGLTRPDGQRLQFGYDKLTRFNQVTNA
LGETYRYSHDLAGQIVAETDFTGRTLHYQYDAVGRRIWARYPDGRLIRWHYSIRDQVVEQ
QTWRCDELSSSLVARVSYNYDDSGRLLKAENAAAVVEFDYDDSGQLIAERLNGREIQHQW
DALTGTPSARRVGELGLEFVYGSLGELTQLQLAGHQPLRLQHDKLGRETVRESAAGFIQA
SNYTPTGLLANQAAGRNSALFQQQLAAPEGAATPALYGSAVNRSWQYDRAYNVVGIDDSR
WGKTRYQYDLNDQIVRADFGGFLPLQEQFSYDANHNLTWQARLPRGATAVLEQDAQHQLA
GRVISRGNNQYHYDKAGRLSEKRELKDGFRPQVWRYHWDEQDQLSELMTPSGERWRYGYD
AFGRRIRKLRLVSNAPAASTQGDETAASEKTGQVGYEYLWSGDQLIEEVPIYADGTAAYD
QSIHWLYAPGALTPAARYENGKLHYVVADHLGTPRELLNEQGKVVWANRLSTWGRAELWR
QAANDEDNVTCNLRFAGQYADAESGLHYNRFRYYDGETGQYLCPDPIGLLGGMNPYAYVP
NPLTWTDPLGLAKCGVGEYKDVGGHHVHAKAGFKNNVKYDPKKGFSISQDYMDKMGLDHQ
AMTSYQRQAFKNLYNSGRSNSFSEHTKIAVNALEAGGATTQQARDLVAQSLWNLRSQGAL
SPSNIPWYQ
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgggcaaggagtatggacaggtgccggtgctgcgggtggccggtcggctgtt
cgtcaagaagtgatggatcagcaacgtggtgcatcgccacccaacaccaatgaaggcggt
gctgagtcttttaatgaacaagccctcaactttatggaaagtgaaggggtaaacaatacg
gttaccgcaggcatgggcgcttatgccattgctactggcgcgggggcaccctttgccgtg
gggttggccgcaggttatgtcggggccaaggctgggagctatgtcggtgaaaaagcaggt
gacgccattgctgagtcactgggctggaaaaaggtcgcaacagatggcgatgctccggct
cgtatgggtgattttattgcgcaccagaaaaaagatctcggttcttggggggcactgggc
ggcatactgctgggggcggttgccgctgtcgctgtcggggcactggtggtcgcaaccggt
ggtgccgcgctggtggtggtggccgccgctgctgccgcaggtggttttgtaggagccggt
gttgccgtggccggagcggtgatggggcagtacggtgataataaaggtacgattcttagc
ggttctcctgacgtgttttttgagggcaaacccgtcgcgcgagtgggcgatcccattatt
tgtagcgaccatcccggagcgccgccggttatcgctgaaggggcaaaaacggtttatgcc
aacggcaagcagattgcccgtttggggcaccgtaccacctgtgatgccaatatcaatagc
ggtgctgccactatcgctgaaactaaagaaacagcacaagtctttgccgtaaaagacagc
cgtagttcagccttacgttgggtgacaattgttgccagttacctgccactgccaaaaggg
aaaaaaggcgagaaacctaaaaaatccgttgaagcagaagggtgtagcaacaataaatgt
accagaccgggtgagccggtagatgcggccacaggcgacttcctgcaagtgtggccgatg
attgatatccccggattactgccactcaatttgacccggctctaccgttccagcgggaca
ttatcgggcagttttggtgctaaatgggccgatagttggtcacagcatcttattattgag
caggatattattcgttttcgcaaccatgaaggcgtgttgctgagctatgatgcgccgcaa
gatgacgatgatgttcaagcggtaaacctgcatgaaggccagtacctgttatacggccaa
cgtagcggtgtgctgcatatcttcaaccgccaaacccaacagatcctgagttttgcagaa
agacagggtgattctcgctgcttatcggcaatcagcgaccgttttggtaaccaaattcgt
tttcgttattctgttgatcagcagctttcccgcattgagcatagtgtgggttatgcgctt
gaactgagctatcagcagcagcaactgaccctgattgagctggtcactgcggctcaacgc
caatggctggttaaatgtcgctatgacgaaaatggcctgttggctgaatgcgacaccttc
cagttcacccacctttatcatacctataatgccgccggccatatgactcgctggcatgat
actgacaaaactgatgcctatattcattatgaccaacttggcagagtgctttctacccgc
accgccagcggacattatcaggatcgctttagttatgatgatgtggcccgctgtactacc
tatcaggatgccgaagggggattcactcgcttttggtataacactgatggtcaggtgatc
cgcgaagttgacccattggggcgcgagcacctgacggagtgggcattcagcaataaactt
tcagaaacggacgccttagggcgcactctggtgttccagcgcaatccgcacagtgaattg
cagcaggtggttacccccgcaggtgatacctatcgctatgactacaatggttttgggcaa
atcacgcaaagcaccttacctgatggtaagtgctggcaatttatctacggcgataacggt
gaattgtgcaacgttgttgacccacaggggcggcggcaggaataccgttatggtgagcag
ggtgagctggtgcggcaaatcttgcccgacggcattgaatggcgttatcgctataacact
cagtatcaagttagtgagattatcgcccccgatggcggcgtaaccttgctgaatcaggac
atttttggccggatactcgatacccaagacccgttaggtcagacgacccgctctatctac
agcccacaacatgccagtcccgctggcagcgtgaatcacgtctatctccccgatggcgtg
gagcaggcgatagcctatgacagtgaaaaacgagtcgcggctctgaccgatggtgcaggc
aaaaccacgcgctatgagtacggtggttttgatttactggttggcctgacgcgccccgat
gggcaacgactgcaatttggttatgacaagctgacgcgatttaatcaggtgaccaatgca
ttaggggaaacatatcgttatagccatgatttagccggacaaattgtagctgaaacggat
tttaccgggcgcacccttcactatcaatacgatgccgttggccgacgcatttgggcgcgc
tatcccgatggccgtctgatccgctggcactattcaatccgtgatcaggtcgtggagcaa
cagacctggcgctgcgatgaactcagctcctcgctggttgcccgtgtcagttataactat
gacgacagcggccgtttgcttaaagcggagaatgcggctgcggtggttgaattcgactac
gacgattcaggccagctaatcgccgaacggctcaatggccgtgaaatacagcatcaatgg
gatgcgttaaccggcacaccgagcgcccgtcgggtgggtgaactggggctggaatttgtt
tacggctcactgggggaactgacccagctacagcttgccggtcatcagcccctgcgtttg
cagcacgataagttagggcgggaaaccgtgcgcgaaagtgcggccgggtttattcaggcg
agcaattataccccgaccgggctgttggctaatcaggctgcggggcgcaactctgcgcta
ttccaacaacagttggcggcaccggagggcgcggcaactcccgcgttgtacggcagcgcg
gtcaatcgcagttggcagtatgatcgtgcgtataatgtggtggggattgatgatagccgc
tgggggaaaacccgctatcagtatgaccttaacgaccagatagtgcgtgctgacttcggt
ggcttcctgccgttgcaggagcaatttagctatgatgcaaaccacaacctgacctggcag
gcgcgtttaccgcggggtgcgacggcggttttagaacaggatgcgcaacatcagttagcg
gggcgggttatttcgcgcggtaacaaccaatatcactacgataaagcgggaagactgagt
gaaaaacgtgaacttaaggacgggttccggccacaggtgtggcgctatcactgggatgaa
caggatcagttatccgagttgatgaccccttccggtgagcgttggcgctatggttatgat
gcctttgggcggcgaattcggaaattgcgtttggtcagcaacgcgccagccgcttcaact
caaggtgatgaaacggcggcatcagagaaaaccggccaggtgggttatgaatacctgtgg
agtggtgatcagctgattgaagaagtgccgatctatgctgatggcacggcggcttatgat
caaagtattcactggctatatgcgccgggggcattaacgcccgcggcccgctatgaaaac
ggtaaattacattatgtggtagccgaccaccttggcacgccgcgcgagctgctcaatgag
caaggcaaagtggtgtgggcgaaccgcctgagcacctggggccgcgccgagttatggcgg
caagcggcgaacgatgaagataatgtcacctgcaacctgcgttttgccggtcagtatgcg
gatgcggagtccgggttgcattacaaccgtttccgctattatgatggtgaaacagggcaa
tatttatgcccagacccgatagggctgttgggggggatgaacccttatgcatatgttcca
aacccactgacgtggactgatccgctagggttagcaaaatgtggcgttggcgaatataaa
gatgttggtggccatcacgtacatgctaaagcagggtttaaaaataacgtcaagtatgat
cctaaaaaaggattttcaattagccaagattatatggataagatgggattagaccatcag
gctatgacctcatatcaaagacaggcgttcaaaaatctttataatagtgggcgttctaat
tcttttagcgaacacacgaaaatagcagtcaatgcattagaggcagggggcgcaacaaca
cagcaagcaagagaccttgttgctcaatcattatggaatttacgttctcaaggcgcactt
tccccctcaaatattccttggtatcaatag
DBGET
integrated database retrieval system
