Yersinia aldovae: AT01_2044
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Entry
AT01_2044 CDS
T03605
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
yal
Yersinia aldovae
Pathway
yal02020
Two-component system
yal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AT01_2044 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AT01_2044 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yal03021
]
AT01_2044 (rpoN)
Transcription machinery [BR:
yal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AT01_2044 (rpoN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AJJ61983
LinkDB
All DBs
Position
2202280..2203713
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AA seq
477 aa
AA seq
DB search
MKQGLQLKFSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHEEIDAKE
VVDSESLDTREALEQKDMPEELPLDATWDEIYTAGTPSGMGNDYSEDELPVYQGETTQTL
QDYLMWQVDLTPFSDTDAAIATSIVDAVDETGYLTVPLEDILESMGDENVALDEVEAVLK
RIQHFDPIGVAARNLRECLLVQLSQYAKDTPYLAEARLVISEYLDLLGNHDFRTMIRLSR
LKEDTLKEAIALIQSLDPRPGQSINTGESEYVIPDVLVHKDKGQWVVELNADSIPRLKIN
QQYAAMGSSTRNDSDGQFIRSNLQEAKWLIKSLESRNETLLKVARCIVEQQVAFFENGAE
FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLVAAENPAKPLSDSKLTTLLCEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaagttcagccaacaactggcgatgactccgcagcttcaa
caggccattcgcttgttgcaactttctacgcttgaactccagcaggagattcaattagcg
ttggagagtaaccccctgcttgagcaaactgatcttcacgaagagattgatgccaaagaa
gtcgtagacagtgaatcgcttgatacccgcgaggcgctggaacaaaaagatatgccggaa
gagttgccgcttgatgccacctgggatgaaatttacaccgcaggaacgccatcaggtatg
ggcaatgattacagcgaggacgaattaccggtctatcagggggaaactacccaaacgctg
caagattatctgatgtggcaagtggatttgacgccgttctctgataccgatgccgccatc
gcaacctctatcgtcgatgccgtggatgagacgggctatctcaccgtcccgctggaagac
atcttagaaagcatgggcgatgaaaatgtcgcactagatgaagtcgaagcggtactcaag
cgaatccaacactttgatcccattggtgttgccgccagaaatctgcgtgaatgcctgctg
gtacagttatcgcaatatgccaaagacaccccctatctggctgaagcacgcctggtcatt
agcgaatatctggatttgctaggcaaccatgatttccgcacgatgatccgtttaagtcgg
ctaaaagaagatacactgaaagaagcgatcgccttgatccagtcgttggacccgcgtcct
ggccaatctatcaataccggggagtctgaatatgtcatccccgatgtgctggtacacaaa
gacaaaggccagtgggtggtcgaactgaatgccgatagcattccccgtctgaagattaat
caacagtatgcggcgatgggcagcagtacgcgcaatgatagcgacgggcagtttatccgt
agcaatctacaagaagcgaaatggctgataaaaagccttgaaagccgtaatgaaacgcta
ctcaaagtggcgcgttgcattgttgagcaacaggtcgcattctttgaaaatggggcagaa
tttatgaaacctatggtgctggctgatattgcccaagccgtagatatgcatgaatcgacg
atctcccgcgtgaccacgcagaaattcctgcacagtcctcgggggattttcgagctgaaa
tatttcttctccagtcacgtcaataccgatagcgggggcgaagcctcttccactgctatt
cgtgcactggtgaaaaaattggttgcggcagaaaacccagccaaaccactgagtgacagc
aagctcaccacactgttatgtgaacaaggcattatggtggcgcggcgcactgttgcgaag
taccgagagtcgttatccatcccgccgtcaaatcagcgtaaacagttggtttga
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