Yersinia aldovae: AT01_2424
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Entry
AT01_2424 CDS
T03605
Name
(GenBank) diguanylate cyclase domain protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
yal
Yersinia aldovae
Pathway
yal02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AT01_2424
Enzymes [BR:
yal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AT01_2424
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_9
PAS_4
RIP
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AJJ61776
LinkDB
All DBs
Position
2617605..2619593
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AA seq
662 aa
AA seq
DB search
MFQDQDTSILNTYFGTHSPFWRLAFDSQALELSAIKGTTNIAIPLNSVQTMKIRSLTGIT
SSLHVEIEIYGNPLHLHLVGRKINDKEWGGTASAYADTEAVARDLVMGLSFAEQVVSEAN
SVIVILDKDGFVQRFNRLSEEYTGKKEQDVIGKNVYDLFMTPKEAASSRKNIERFFQQGA
SYEVERWVNTVKGKRLFLFRNKFVHSGSGKNERYLICSGTDITKERRAQERLRILANTDM
ITGLPNRHAIHERINSAIQTRSDTSVGIIYLDLDNFKKVNDHYGHMFGDRLLKDVSLAIL
SCLDDNEMLARLGGDEFIVLVENATLSKLEATAQRILTRMKLPFRIGLIEVYTGCSIGIA
LCPEHGDTLENIIRSADTAMYTAKEHGKQTYSIFSQEMNKKVSEYIWLDTNLRKGLEQHQ
LKVFYQPKISNKSGKVHSVEALVRWHSPERGLIAPGKFISYAEESGLIGPLGKWVLQTAM
QQAVDWKERGINLRVAVNVSARQLIDEAIVTSFIESLEVSKLESSLVDVELTESCLIEDE
SAAINIMKQLRHLGAQVHLDDFGTGYSSLSQLARIPIDAIKLDQSFVRDIDNNPISQSLV
RAIIVVAEALKMRVIAEGVETKGEEQFLDSIGVDEKQGFFYAKPMPADELEHWLVTQHLS
PN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagaccaagacacgtcgatcctcaatacctactttggtactcatagccctttt
tggcggcttgcttttgatagccaggctctggaattgtctgcaattaaagggacaacaaat
attgcgattccccttaattcagttcaaaccatgaaaatccgcagcttaactggtattact
tccagtctgcatgttgagattgagatatatggtaatccactacatttgcatcttgttggc
cgtaaaattaacgacaaagagtggggaggcaccgcttctgcctatgccgataccgaagcg
gtcgctcgcgatttagtgatggggctttcctttgctgagcaggtggtttctgaagccaat
tccgttattgttattctcgataaagatggttttgttcaacgttttaatcgcctgagcgaa
gaatatactgggaaaaaagaacaagatgttattggtaaaaatgtctacgacttgtttatg
acgcccaaagaggccgcatcatcacgcaaaaatattgaacggttcttccaacaaggagca
tcttatgaagttgaacgttgggttaataccgtaaaaggaaagcgtctcttcttattccgt
aataagttcgttcacagcggtagtggaaaaaatgagcgttatctaatctgttcaggtaca
gatattacgaaagaaaggcgtgcccaagagcggctcaggatcttggctaataccgatatg
attactggcctgccgaatcgccacgctattcatgagcgcattaacagtgcaattcagaca
cgctctgatacctcagtaggtattatttatctcgatctcgacaacttcaaaaaagtgaat
gaccactacggccatatgttcggtgaccggttactgaaagatgtttcattagctatttta
agttgtttagatgataacgaaatgcttgccagactgggtggtgatgaatttattgttctg
gtcgaaaatgctaccttaagtaaacttgaagcaacggcacagcgaattcttacccgaatg
aaattacctttccggattgggttaatagaagtgtatacaggttgctctatcggtatagca
ctatgcccggaacacggggatacattggaaaatataatccgtagtgcagataccgctatg
tataccgcgaaagaacatggaaaacaaacctactcaattttctcacaagagatgaataaa
aaagtctctgaatatatatggcttgataccaatttacgtaaaggtctggaacagcatcag
ttaaaagtcttctatcagcccaaaatatccaacaaatccggtaaagtacacagtgtcgaa
gcattagttcgttggcattcgcctgagcgtggtttaattgctccgggtaaatttatctct
tatgcggaagagtcaggattaattgggccattaggcaaatgggtactgcaaaccgcgatg
caacaagctgttgattggaaagaacgtgggatcaatctaagagttgcagtcaatgtttct
gcccgccaattaattgatgaagctatcgtaaccagctttattgaatcacttgaggtcagt
aagttagagtccagtttagtcgatgtcgagctaactgagagttgtttaattgaagatgaa
agtgcagctatcaacatcatgaaacagttgcggcacttgggtgctcaggttcatctggat
gatttcggcactggctattcttcactatcacaattagctcgtattcctattgatgctatt
aagctggatcaaagttttgttcgcgatattgataataatcctatttcacaatctttggtg
agagccattatcgtggtcgctgaagcactcaagatgcgggtaattgcggagggtgtcgaa
accaaaggagaagaacaattcctagattctatcggtgttgatgaaaaacaaggattcttt
tacgccaaaccaatgcccgcagatgaactggagcattggctggtgacgcaacacctttca
ccgaattaa
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