Yersinia aldovae: AT01_2512
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Entry
AT01_2512 CDS
T03605
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
yal
Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yal03016
]
AT01_2512 (trmE)
Transfer RNA biogenesis [BR:
yal03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AT01_2512 (trmE)
Prokaryotic type
Methyltransferases
AT01_2512 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Ras
ABC_tran
Roc
AAA_28
Arf
SRPRB
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
AJJ63945
LinkDB
All DBs
Position
complement(2717070..2718434)
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AA seq
454 aa
AA seq
DB search
MSTTDTIVAQATPPGRGGVGILRVSGRAAATVAQAVLGKLPKPRYADYLPFKDVDGSTLD
QGIALYFPGPNSFTGEDVLELQGHGGPVILDLLLKRILALPELRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSAVNSLQGAFSVRIHQLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEGQLNGVMAELEQVRTEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREAGDEVERIGIERAWNEIEQADRVL
FMVDGTTTDATEPAAIWPEFMARLPATLPITVVRNKADITGETLGLTEVNGHSLIRLSAR
TGEGIDLLRNHLKLSIGFTSNTEGGFLARRRHLQALEAAAQHLVQGHEQLVSAYAGELLA
EELRLAQQSLSEITGEFSSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccactgatactatcgtcgctcaagcaacaccgccaggccgtggtggcgtgggt
attttacgtgtttcaggtcgtgctgccgccacggttgcgcaagcggttttaggtaaatta
cccaagccacgttatgccgattatctgccgtttaaagatgtcgatggcagcaccttggac
caaggtatcgctctttacttccctggcccgaattccttcactggcgaggacgtgctggaa
ctgcaaggtcacggtggcccagttatactggatttactgttaaaacgcattctggccctg
ccagagctgcgtattgcccgcccaggggagttctctgagcgcgcattcttaaacgacaag
ctggatctggcgcaggcggaagccattgctgatctgattgacgccagctcagagcaagca
gcacgctcggcggtgaattcattacagggcgcattttcagtccgtatccatcaattggtg
gaagcacttactcacttgcgaatctacgtcgaagcggcaattgacttcccagatgaggaa
atcgacttcctttctgatggtaaaattgaaggccaactgaacggcgtaatggctgaactg
gagcaagtgcgcactgaagcccgacaaggcagtttgctgcgcgaagggatgaaagtggtg
attgctggccgccccaatgccggaaaatccagtttactcaatgcgttagcggggcgtgag
gcggcaattgttaccgatatcgcgggaacaactcgtgatgttttacgagagcatattcat
atcgatggaatgccactgcatatcattgataccgccggcttacgtgaagccggtgacgaa
gttgagcgcattggtatcgaacgtgcgtggaacgagatagaacaagctgatcgggtgctg
tttatggttgatggcaccaccacagatgccactgaaccggccgctatctggcccgagttt
atggcgcgcttacccgcgacactgccgatcactgtagtgcgtaataaagccgacatcacc
ggtgaaaccttaggtctgaccgaagtaaatggtcactcactaattcgcttatcggcccga
accggtgaaggtattgacctgctgcgtaatcatctcaagctgagtatcggctttaccagc
aacaccgaaggcggttttctggcccgccgccgtcatttacaagcactggaagcagcagcc
cagcatctggtacaaggtcacgaacagttagtaagcgcttacgctggggagttgctggcg
gaagagctgcgtttagcacaacagtcattgagcgaaattaccggtgaatttagctctgat
gacttactggggcgaattttctccagtttttgtattggaaaatga
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