Yersinia aldovae: AT01_2888
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Entry
AT01_2888 CDS
T03605
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
yal
Yersinia aldovae
Pathway
yal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT01_2888 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yal03019
]
AT01_2888 (groL)
03110 Chaperones and folding catalysts [BR:
yal03110
]
AT01_2888 (groL)
03029 Mitochondrial biogenesis [BR:
yal03029
]
AT01_2888 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yal04147
]
AT01_2888 (groL)
Enzymes [BR:
yal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AT01_2888 (groL)
Messenger RNA biogenesis [BR:
yal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AT01_2888 (groL)
Chaperones and folding catalysts [BR:
yal03110
]
Heat shock proteins
HSP60 / Chaperonin
AT01_2888 (groL)
Mitochondrial biogenesis [BR:
yal03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AT01_2888 (groL)
Exosome [BR:
yal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AT01_2888 (groL)
Exosomal proteins of other body fluids (saliva and urine)
AT01_2888 (groL)
Exosomal proteins of breast cancer cells
AT01_2888 (groL)
Exosomal proteins of colorectal cancer cells
AT01_2888 (groL)
Exosomal proteins of bladder cancer cells
AT01_2888 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AJJ63090
LinkDB
All DBs
Position
3133283..3134929
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARIKMLRGVNILADAVKVTLGPKGRNVVLDKSFGSPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDSTVGELIAQAMEKVGKEGVITVEEG
SGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKTTLEDLGQAKRVVINKDTTIIIDGIGDEAAISGRVTQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAAHAISGLKGDNEDQNVGIKVALRAMESPLRQIVVNAGEEASVIANNVKAGEGSFGYNA
YTEEYGDMIAMGILDPTKVTRSALQYAASIAGLMITTECMITDLPRDDKGGDMGAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgcacgcatcaaaatgctacgcggcgta
aacattcttgctgatgcagtaaaagtgaccctgggcccgaaaggccgtaacgtagttctg
gacaagtcttttggctctccaactatcaccaaagacggtgtttcagttgcgcgtgagatc
gaactggaagacaagtttgagaacatgggcgcacagatggttaaagaagttgcctctaaa
gcgaacgatgctgcgggtgacggtaccactactgcaactgtattggctcaatccattatc
actgaaggcctgaaagcagttgcggccggcatgaacccaatggacctgaaacgcggtatc
gacaaagccgttatcgcggcggttgaagaactgaaaaaactgtctgtaccttgctctgac
tctaaagctatcgcgcaggtagggactatctctgccaactccgactcaaccgtcggtgag
cttatcgcacaagcgatggaaaaagtgggcaaagaaggcgttatcaccgttgaagaaggt
tcaggtctgcaagacgagctggacgtcgtcgaaggtatgcagttcgaccgtggttacctg
tctccttacttcatcaataaaccagaaaccggttctattgaacttgaaagcccattcatc
ctgttggctgacaagaaaatctctaacatccgcgaaatgctgccagtgttggaagcagta
gcgaaagccggtaaaccactgctgatcatcgcagaagacgttgagggcgaagctctggcg
actctggtggttaataccatgcgcggcattgttaaagttgcagcggttaaagcacctggc
ttcggtgaccgtcgcaaagctatgctgcaagacatcgcaaccctgactggcggtaccgtt
atttctgaagagatcggtctggaactggaaaaaaccactctggaagatctgggtcaggca
aaacgtgttgttatcaacaaagacaccactatcatcatcgatggtatcggtgacgaagct
gcgatttctggccgcgtgactcagatccgtcagcaaatcgaagatgcaacttctgactac
gacaaagaaaaactgcaagagcgtgttgctaaactggctggcggcgttgccgttatcaaa
gtgggcgccgcaactgaagttgaaatgaaagagaagaaagcgcgcgttgaagatgctctg
cacgcaacccgtgctgcggtagaagaaggcgtagtcgctggtggtggtgttgcactgatt
cgtgcagctcatgctatctctggtctgaaaggcgacaacgaagaccagaatgtcggtatc
aaagttgctctgcgtgcgatggagtctccactgcgtcagatcgtggttaacgctggtgaa
gaagcctctgttatcgcgaacaacgttaaagcaggcgaaggtagcttcggttacaacgct
tatactgaagaatatggtgatatgatcgcgatgggcatcttggatccaactaaagtgact
cgttctgctttgcagtacgcagcctctattgctggcctgatgatcacgaccgagtgcatg
atcactgacctgccacgcgatgacaaaggcggtgatatgggcgctggcggcatgggtggt
atgggcggcatgggcggcatgatgtaa
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