Yersinia aldovae: AT01_2973
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Entry
AT01_2973 CDS
T03605
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yal
Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yal03016
]
AT01_2973 (truB)
Enzymes [BR:
yal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AT01_2973 (truB)
Transfer RNA biogenesis [BR:
yal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AT01_2973 (truB)
Prokaryotic type
AT01_2973 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AJJ61510
LinkDB
All DBs
Position
3219752..3220717
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AA seq
321 aa
AA seq
DB search
MGRPRRRGRDINGVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREVNVTQTQMDAALDRFRGHSQ
QVPSMYSALKHQGKPLYEYARQGIDVEREARSITVYELLFIRWEGNDLELEIHCSKGTYI
RTIVDDLGELLGCGAHVSYLRRLQVATYPSERMVTLEQLTAMVEAAQAEERSPNPELDLL
LLPMDSAVLNFPEVNLLPAVAAYVKQGQPVHVSGAPGEGMVRITEGEEHKFIGIGTIAED
GRVAPKRLVVESADVESSVIA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtccacgtcgtcgcggccgtgacattaacggcgttctgttattggataagccg
ctgggcctctcctctaatgatgttttgcagaaagtaaaacgtctctttagcgctaaccgc
gcaggtcataccggtgcgctcgatccattggcaaccggtatgttacctatctgtttgggc
gaagcgaccaagttttcccaattcttgctggattccgataaacgttatcgcgtggttgct
cgcttaggtcaacgtaccgatacttcagatgctgaaggtgcgttaatcagtgagcgtgag
gttaacgtcactcaaacccagatggatgccgcgttagaccgtttccgtggtcatagccag
caagtgccgtccatgtattctgcactgaagcaccaaggcaagccgctgtatgaatatgcc
cgtcaggggattgacgtcgagcgtgaagcccgcagtattacggtgtacgaactgctgttt
atccgctgggaaggcaatgaccttgagctggaaatccactgttccaaaggcacctatatt
cgcaccattgttgatgatttgggtgaattgttgggttgcggcgcacatgtgagttatctg
cgccggttgcaagtggcgacttatccaagtgagcgtatggtgacgttggagcagttaacg
gcgatggtggaagcggcacaggcagaagagcgctcgcccaatccagagctggatctgctg
ttacttccgatggacagtgctgtgcttaacttccctgaagtcaatctgttacctgcggtt
gccgcttacgtgaaacagggccagccggtgcatgtttcgggtgcgcctggtgaaggtatg
gttcgtatcactgaaggcgaagagcataaattcattggtattggtactatcgctgaagat
ggtcgtgtggcacctaaacgcctggttgtggaaagtgcggatgtagaaagttcggtcatc
gcgtaa
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