Yersinia aldovae: AT01_2975
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Entry
AT01_2975 CDS
T03605
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
yal
Yersinia aldovae
Pathway
yal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT01_2975 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yal03019
]
AT01_2975 (pnp)
03016 Transfer RNA biogenesis [BR:
yal03016
]
AT01_2975 (pnp)
Enzymes [BR:
yal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AT01_2975 (pnp)
Messenger RNA biogenesis [BR:
yal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AT01_2975 (pnp)
Transfer RNA biogenesis [BR:
yal03016
]
Prokaryotic type
tRNA degradation factors
AT01_2975 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
S1_RRP5
S1_2
aRib
UPF0181
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AJJ62951
LinkDB
All DBs
Position
3221370..3223490
Genome browser
AA seq
706 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQINPDIVALIGASAALSLSGIPFNGPIGAARVGFINDQYVLNPTTDELKESRLDLVVA
GTAAAVLMVESEAQILSEDQMLGAVVFGHEQQQIVIENINALVAQAGKPKWDWHAEPVNE
ALHARVAELAEARLGDAYRITEKQERYTQVDAIKADVTAVLLAQDETLNAGEIHDILGDV
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLLHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPSPSE
FPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKKDDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIYTMKINPEKIKDVIGKGGSVIRALTDETGTTIEIEDDGTIKIAAT
DGDKAKHAIRRIEEITAEIEVNRIYDGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVKVKVMEVDRQGRIRLSIKEATTPDAEAPAPEAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgactccgattattcgtaaattccagtacggtcaacataccgttaccattgaaacc
ggcatgatggctcgtcaggcaaccgccgctgtaatggtaagcatggacgacaccgcagtt
tttgtgactgttgttggccaaaagaaagccaaaccaggccagagcttcttccctctgacg
gttaactatcaggagcgtacttacgctgctggccgcatcccaggcagcttcttccgtcgt
gaaggccgcccaagtgaaggcgaaacactgacttcacgtctgattgaccgcccgattcgc
ccactgttcccagacagcttcctgaatgaagttcaggtgattgcgactgtggtttcggtt
aacccacaaattaacccggatatcgtggcattgattggcgcatctgctgcactgagcctg
tcaggtattccattcaacggcccaatcggtgctgctcgtgttggttttatcaacgaccag
tatgtactgaacccaaccaccgacgagctgaaagaaagccgtctggacttggttgttgcc
ggtactgctgccgcagtattgatggttgagtcagaagcacagattctgtctgaagatcag
atgttaggcgcggtggtcttcggtcacgaacaacagcaaattgtgattgaaaatatcaac
gctctggttgctcaagcgggcaaaccgaagtgggattggcatgctgaacctgttaacgaa
gcgcttcatgcgcgcgtggctgagctggcagaagctcgtctgggtgatgcgtatcgtatt
actgagaagcaagaacgttacactcaggttgatgcgattaaagctgacgtaaccgcagtg
ctactggcacaagatgaaacgttaaatgctggtgagatccatgacattctgggcgatgtt
gagaaaaacgtcgtgcgtagccgtgtattgcgtggcgagccgcgtatcgatggccgcgaa
aaagacatgatccgtggtctggacgtgcgcactggcgtcttgccacgtacccacggttct
gcgctgttcacccgtggcgaaactcaggcgctggttaccgccacactgggtacggctcgt
gatgcgcaaaatattgatgaactgatgggtgagcgtactgactcattcctgctacactat
aatttccctccatattgtgttggtgaaaccggcatggttggttcacctaagcgtcgtgag
atcggtcatggccgtctggcgaaacgcggtgtgttggcagtaatgccaagcccgagcgag
ttcccttataccattcgtgtggtttctgaaatcaccgagtctaacggttcttcctcaatg
gcctctgtttgtggtgcttctttggccctgatggatgcgggtgtaccaattaaagccgct
gttgctggtatcgcaatgggtctggttaaaaaagatgacaactttgttgttctgtccgat
attctgggtgacgaagatcacttaggcgacatggactttaaagtagctggtagccgtgat
ggtatcaccgcactgcaaatggacattaaaattgaaggtatcacccgcgaaatcatgcag
gtggctctgaaccaggctaagggtgcgcgtttgcacattctgggtgttatggaacaggct
atcagtacaccgcgtggcgatatctctgagtttgctccccgtatctacaccatgaaaatc
aatcctgagaaaatcaaggatgtgatcggtaaaggtggttctgtgattcgtgcgctgact
gatgaaactggcactaccattgaaattgaagatgatggcaccattaagattgcagcaacc
gacggcgacaaagcgaaacacgctatccgccgcatcgaagaaattactgctgaaatcgaa
gtgaaccgtatctatgatggtaaagtgacccgtatcgttgatttcggtgcattcgttgct
atcggtggcggtaaagaaggtttggtacatatttctcaaatcgctgacaagcgcgtagag
aaagtgacagactatctgcaaatgggccaggaagtgaaagttaaagtaatggaagttgat
cgccagggccgtatccgcctgagcatcaaagaagccactactcctgacgcagaagctccg
gcaccagaagcagcagagtaa
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