Yersinia aldovae: AT01_2986
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Entry
AT01_2986 CDS
T03605
Name
(GenBank) beta-eliminating lyase family protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
yal
Yersinia aldovae
Pathway
yal00330
Arginine and proline metabolism
yal00480
Glutathione metabolism
yal01100
Metabolic pathways
yal01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
AT01_2986
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AT01_2986
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
AT01_2986
Enzymes [BR:
yal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
AT01_2986
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
AJJ64769
LinkDB
All DBs
Position
complement(3234334..3236496)
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AA seq
720 aa
AA seq
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MKELKIAASISAMPCFDSQREVIDVLHTDFTDVAAVVLSVQDINHGMINSIHELGLNIPI
YAAVCCEEELNSDVLPSLNGVFELCGNNTNFYGKTLETAAKKYESELLPPFFNTLKKYVE
MGNSTFACPGHQGGQFFRKHPAGRQFFDFYGEAIFRSDMCNADVKLGDLLIHEGAPCDAQ
KHAAKVFNADKTYFVLNGTSASNKVATNALLARGDLVLFDRNNHKSNHHGALVQAGATPV
YLETARNPFGFIGGIDAHCFEEKYLREQIRSVAPERANEARPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQDRYCNHKRFNNAFMMHASTSPFYPLFAALDVNAKMHEGKSGQRM
WLDCVKTGIEARKMILSTCNMIKPFVPVEVDGKPWQEYDTEAMAQDLRFFNFIPGEKWHA
FEGYEESQYFVDPCKLLLTTPGIDTNTGEYTESGIPATILANFLRENGIVPEKCDLNSIL
FLLTPAEDLAKMQHLVAQIARFERFIEEDELLSVVLPTVYSNNETRYKDYTIGKLCQEMH
DLYVSYDVKQLQKEMFRKQHFPKVMMNPQDANIEFVRGHAELVPLCKAEGRIAAEGALPY
PPGVLCVVPGEVWGGAAQRYFLALEESINLLPGFAPELQGVYLQVDEDGWNRAYGYMMKQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattaaagattgcggcaagtatatctgccatgccttgttttgattcacagcgt
gaagtaatcgatgttttgcacaccgactttactgatgttgccgccgtggtactttctgtt
caggacattaatcatggcatgattaatagcattcatgaattagggctaaatattccaatt
tatgccgctgtttgctgcgaagaagaactaaattcagatgtgttaccgtctttaaatggt
gtatttgaattatgcggaaataatactaatttttatggtaaaacgttggaaaccgcagca
aaaaaatatgaatcagagctgctgccacccttctttaataccttaaaaaaatatgtcgaa
atggggaattccacctttgcctgtccagggcatcaaggtggccaattcttccgtaaacac
ccagcgggccgtcaattctttgacttctatggcgaagcaattttccgctctgatatgtgt
aatgctgacgttaaattaggtgacttgcttattcatgaaggcgcaccttgtgacgcacaa
aaacatgcagcaaaagtatttaacgcggataaaacctatttcgtactgaacgggacttcc
gcctccaataaagtggctactaatgcattgttagcccgtggtgacctggtactgtttgac
cgtaataaccataaatccaaccatcacggcgcactggttcaagccggtgctacgccggta
tatctggaaacagcccgtaacccgtttggctttattggtggtattgacgcccactgtttt
gaagaaaaatacctgcgtgaacaaatacgtagtgtagcgcctgaacgtgctaacgaagcg
cgtccattccgcctggcaattatccaattagggacttatgacggcaccatttataacgcc
cgtcaggttgtggataaaattggccacttgtgtgactacattttgtttgactctgcttgg
gtaggctacgaacaatttattccaatgatgaaagattgttcaccattgttacttgaattg
aatgaaaacgatcctggtattatcgttactcaatcagtccataaacaacaagctggcttc
tcgcaaacatcacagattcataaaaaagataaacatattaaaggccaggatcgctactgc
aaccataaacgttttaataatgcctttatgatgcacgcgtccaccagcccattctaccca
ttatttgccgcattagatgttaacgctaaaatgcatgaaggcaaaagtggtcaacgtatg
tggttagattgtgttaagaccggtattgaagcacgtaaaatgatcttaagtacctgtaat
atgattaagccttttgttccggtagaagtggatggcaaaccttggcaagaatatgacacc
gaggctatggcacaagacttgcgcttctttaactttattccgggcgaaaaatggcatgca
tttgaaggttacgaagaatcacaatactttgttgacccgtgcaaattgttattaactacc
cctggtattgatactaataccggtgaatataccgaatcaggtattccggccaccattctg
gctaatttcctgcgcgaaaatggtattgtgccagaaaaatgtgaccttaactctattctg
ttcttattaacaccagcagaagacttggcaaaaatgcaacatttagtcgcgcaaattgct
cgatttgaacgtttcattgaagaagatgaattgttaagtgttgtattaccgacagtctat
agcaataacgaaactcgttataaagactataccatcggtaaattatgtcaggaaatgcat
gatctttatgtcagctatgatgttaaacaactgcaaaaagagatgttccgtaaacagcat
ttccctaaagtcatgatgaatcctcaggatgctaatattgaattcgttcgtggtcatgct
gaattagtgccattgtgtaaagcagaaggccggattgccgcagaaggcgcacttccttac
ccaccgggagtattgtgtgttgtccctggtgaagtttggggtggtgcggctcaacgttat
ttcctggcacttgaagaaagcattaacttattgccaggcttcgcacctgaattacaaggt
gtttatttacaagtcgatgaagatggctggaaccgtgcatacggttacatgatgaagcaa
taa
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