Yersinia aldovae: AT01_3000
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Entry
AT01_3000 CDS
T03605
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
yal
Yersinia aldovae
Pathway
yal00230
Purine metabolism
yal00240
Pyrimidine metabolism
yal01100
Metabolic pathways
yal01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
AT01_3000 (nrdD)
00240 Pyrimidine metabolism
AT01_3000 (nrdD)
Enzymes [BR:
yal01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
AT01_3000 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AJJ64353
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Position
complement(3247755..3249881)
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AA seq
708 aa
AA seq
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MIKRDGCQVSFDEVRIKEAVERAALAVSVVDADYCATVARVVAQTMENQPKVDIRDIQTA
VENQLMAGQYKQLARAYIEYRHDRDISRELRGHLNQEIQGLVEQSNKALLNENANKDSKV
IPTQRDLLAGIVAKHYAKQHILPRDVVLAHERGEIHYHDLDYAPFFPMFNCMLIDLDGML
TQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILAPFVTESFNKHK
AVAEEWQIPDAAGYAMSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTNWQSR
MIQQAILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKFGDANYDIKQLALECATKRMYPD
ILNYDQVVKVTGSFKTPMGCRSFLGVYEEDGKQIHDGRNNIGVISLNLPRIALEAQGDEE
KFWQLLDERLLLAKKALMTRIARLEGIKARVAPILYMEGACGVRLQADDNIAEIFKNGRA
SISLGFIGIHETVNALFGNQAHVFDDEKLRAKGVAIVERMRQATDSWKEETGYAFSLYST
PSENLCDRFCRLDTAEFGVVEGVTDKGYYTNSFHLDVEKKVNPYDKLDFEAPYPPLANGG
FICYGEYPNLQHNLRALEDVWDYSYSRVPYYGTNTPIDECYECGFTGEFACTSKGFTCPK
CGNHEPSKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLVNGQLG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaacgggacggttgtcaggtatcttttgatgaggtgcggatcaaggaagctgtc
gagcgcgcagccctggcggttagcgtggtggacgcagattattgtgcaactgttgcccgt
gtggtcgctcagacgatggaaaaccagccgaaagttgatatccgcgacatccaaactgcg
gtcgaaaaccaactgatggccggtcaatacaagcagttagcccgcgcctatattgaatat
cgccatgaccgggatatctcgcgcgaactgcgtggtcacctcaatcaggaaatccagggt
ttggtagagcaaagcaacaaagcgctgctgaacgaaaatgccaataaagacagtaaagtc
atcccgactcagcgcgatctgctggccggtattgtggcgaaacactacgccaaacaacat
attttgccgcgcgatgtggtcttggcgcatgaacgcggtgaaatccactatcatgacctg
gattacgcgccattcttcccgatgttcaactgcatgttgatcgatcttgatggcatgtta
acccaaggttttaaaatgggtaatgcggaaatagagccgccaaaatccatttctaccgcc
accgccgtgaccgcgcagattatcgcgcaggtcgccagccatatctatggcggcacaacc
atcaaccgcatcgatgaaattctggcaccgtttgtcactgaaagttttaacaaacataag
gcggtcgctgaagagtggcagatcccggatgctgccggttatgccatgtcacgcaccgaa
aaagagtgttacgacgctttccaatcgctggaatatgaagtcaataccctgcataccgcc
aatggccagacgccatttgtcaccttcggtttcgggctaggcacgaattggcaatcgcgc
atgattcagcaagcgattctgcgtaatcgcattgccggtttgggcaaaaaccgtaaaacc
gcggtgttcccgaaactggtgtttgctatccgcgatggcctgaaccataaatttggcgat
gctaactacgatatcaaacagttagctctggaatgtgccaccaaacgcatgtatcccgat
attctcaattacgatcaagtggttaaagtgaccggttcctttaaaacgccaatgggctgt
cgcagcttcctcggtgtatatgaggaagatggcaagcagatccacgatggccgcaataat
attggggttattagcctgaatctgccacgtatcgcattggaagcccaaggcgatgaagag
aaattctggcaattactggatgagcgcctgctgctggccaagaaagccttgatgacccgc
attgctcgtttggaagggatcaaagcccgcgtggcccccatcctgtatatggaaggcgct
tgtggtgtgcgcttgcaagccgatgacaatatcgctgaaatcttcaaaaatggccgcgca
tctatctcgctgggctttattggtattcatgaaacggtgaatgcgctatttggcaatcaa
gcccatgtctttgatgacgaaaagttacgtgcaaaaggcgtggctatcgtcgagcgcatg
agacaagccaccgatagctggaaagaagaaactggctacgcctttagcttgtacagcacg
ccgagcgagaacctatgtgatcgcttctgccgcctggataccgccgaatttggcgtagta
gaaggtgttaccgacaaaggttattacaccaacagcttccatctggatgttgaaaagaaa
gttaacccgtacgataaactggacttcgaagcgccttatcctccattggctaatggcggt
ttcatctgttacggcgaataccctaacttgcagcataacctcagagcgctggaagatgtc
tgggattacagctacagccgagtgccctattacggcaccaacacgccaattgatgaatgc
tacgagtgcggcttcactggcgaattcgcctgtaccagcaagggcttcacctgcccgaaa
tgcggcaatcatgaaccatcaaaagtgtcagtcacccgtcgggtatgtggctatttgggc
agcccggatgcacggccctttaacgccggtaagcaagaagaagtgaagcggcgcgttaag
catttggtaaacggacaactgggctaa
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