Yersinia aldovae: AT01_3069
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Entry
AT01_3069 CDS
T03605
Name
(GenBank) PAS fold family protein
KO
K05880
transcriptional activator for dhaKLM operon
Organism
yal
Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yal03000
]
AT01_3069
Transcription factors [BR:
yal03000
]
Prokaryotic type
Other transcription factors
Others
AT01_3069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
GAF
PAS_4
PAS_8
AAA_5
AAA_2
AAA_16
PAS_9
AAA_7
PAS_7
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
AJJ61753
LinkDB
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Position
complement(3342523..3344445)
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AA seq
640 aa
AA seq
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MSNTRLPATTPALAGSWQRCQKLMQAQQWRAPHRAAGATFQSICQRKNDLLVLGQAALED
AYEYMESRHCVLLILDESGCTLWQCGHPQTLNQLRELGIDCGSYWAEGLIGTNAPALAIA
EGNPIQVSGQQHFKQALHSWQFCATPVYDNSGRQQAVIVLGSKLVDNAASDLPLTLAIAR
EIGNYLHADSLLAETNRHLNELNALLDGVEDGVMAWDQRGCLLYLNRRAAAILQLDETNS
LGKPVTDLLTLPALLTQAILHRNPLSHVEVTFENQQQFISALLTLKPIPDGDRCGFIALL
HPQELLRRMVHSQLGRASYTFDDMPVASLEMRRLVRYGKQAAKGRHPILLHGEEGVGKQQ
LGQAIHNASDRADGPYIVLNCQALPQNLMAREFLGSDAIEGESGQPSKFELANGGTLYLE
QVEYLSPEMQSALLQIVKTGMVMRINSNRVIPVDVRIITATGADLPLLVKQGHFRRQLFY
TLQSFELHIPPLRQRQQDIPLLVQHTLASLGQHFHCQYQPDDSVMRQLRQYPWPGNDQEL
KSVVERAAMACRNNSIHLNDLPEHLLGEKLLLEPDMPQPQPVLSLQELERQAIIRAALVC
QGQLNEMATLLGIGRTTLWRKVTLHRLDISQFKGGESLST
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacacgaggctacctgccaccacccccgcgctggcgggatcctggcagcgctgc
cagaaactgatgcaggctcagcaatggcgcgcgccccaccgggctgcgggcgcgacattt
cagtctatttgtcagcgtaaaaatgacttgttggtgctcgggcaggccgcattggaagat
gcctacgaatacatggaatcacgtcattgcgtactgctgattctggatgaaagtggctgt
accttgtggcaatgcggtcacccgcaaactctaaatcagttacgtgaattgggtattgat
tgcggcagttactgggctgaagggctgatcggcaccaatgctccggcgttggcgattgct
gaaggcaatccgatacaagtcagtgggcagcagcattttaagcaggcgctgcattcgtgg
caattttgcgccacgccagtctatgataacagtggccgtcaacaggccgtaatcgttttg
ggcagcaagctggtagataacgccgccagtgacctgccgctgacattagccattgcccgc
gaaattggcaattatcttcacgccgactccctgctggcagaaaccaaccgtcatttaaat
gaactcaatgccctgctcgatggggttgaagatggggttatggcgtgggatcagcgcggc
tgcctgttgtatctcaatcgtcgcgctgccgccattttacaactcgatgaaaccaatagt
ttaggtaagccggtcaccgatttactcaccttgcccgcgttactgacccaggctattttg
catcgcaacccacttagccatgtggaagtcacttttgaaaatcagcagcaatttatttcc
gcgctgctaacgctcaaacccattccagacggtgaccgttgcggtttcattgccttactg
catccgcaagaattactgaggcgaatggttcatagccaattagggcgagccagctataca
tttgatgacatgccggtagcctcgctggagatgcgccgcttggttcgttatggcaagcaa
gcagctaaaggccgtcacccgattttactgcacggcgaagaaggcgtgggtaagcaacaa
ctggggcaggcaatccataatgccagtgatcgcgctgatggcccttatatcgtattgaat
tgtcaggcattaccgcaaaatcttatggcgcgggaatttcttggtagtgacgccatcgaa
ggggaatcgggccaacccagtaaatttgagctggctaacggcggtacactgtacctggag
caggtcgaatatctgtcgccagagatgcaatctgcgctgctgcaaatcgttaaaaccggc
atggtcatgcggattaactccaatcgggtgatcccagtcgatgtgcgaattattaccgcc
accggtgcagacctgccgctattggtgaaacaaggccattttcgccgccagttgttctat
acgctgcaatcttttgaattacatattccgccgctgcgccaacgccaacaggatatccca
ctgctggtacaacatacgctggcgagcttagggcagcacttccactgccagtatcaacca
gatgacagcgttatgcgccagttgcgtcaatatccgtggccgggtaacgatcaagagctg
aaaagcgtggtagagcgagcggcaatggcctgtcgcaataacagcatccatctcaacgac
ttgccggaacacctgctgggggaaaaactgctgctggaacctgatatgccacaacctcaa
cctgtattatcgctgcaagaactggaaaggcaggccattattcgggcggcgctggtgtgc
cagggccagcttaatgaaatggcaaccttattgggaatcggccgtaccacattgtggcga
aaagtaactcttcaccggcttgatatcagccaatttaagggcggcgaatcattatcgact
tag
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