Yersinia aldovae: AT01_3081
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Entry
AT01_3081 CDS
T03605
Name
(GenBank) bacterial regulatory helix-turn-helix, lysR family protein
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
yal
Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yal03000
]
AT01_3081
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
yal01504
]
AT01_3081
Transcription factors [BR:
yal03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AT01_3081
Antimicrobial resistance genes [BR:
yal01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
AT01_3081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_IclR
HTH_20
HTH_23
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AJJ62966
LinkDB
All DBs
Position
complement(3355526..3356452)
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AA seq
308 aa
AA seq
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MDQIQAMRIFVRIVELGSFSRAAEKLQLPRATVSHTLKRLEQRLGVRLLVRTTRQVNITA
EGTLYYQRCLQLLSAFEEADSLFSHQRLQPEGKVRIDMPHSLARNVVIPALSDFYQRYPH
ITLMLGANDSTIDLMREGVDCVLRAWLPHDEQLAVRNIGQQPQITCASPAYLAKQGVPTS
LDDLAGHQAVGYFSRFHNRDYPLEFVQQGKIESRVLPGILSVSGADAYIAAGVAGLGLIQ
APTPGIQSQLAQGELIEILPHCPPPAMPLFIMFPPGRFLAPRVRVLIDWLVELFAHYPPM
LRDRQSGV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaatacaggcgatgcggatatttgttcgcattgttgaattgggcagtttcagt
cgcgcagcagaaaagctgcaattaccacgggcaaccgttagccataccttgaaacgacta
gaacagcggctaggggttcgcttattggtgcgcaccacccgacaggtgaatatcaccgct
gaaggcacactgtattaccagcgctgcctgcaattactgtcggcgtttgaagaagcagat
tcgctgttcagccatcagcggctgcaacctgagggcaaagtgcgcattgatatgccacat
tcgctggcccgtaatgtggtcatcccagcgctgagtgatttttatcagcgctatccacac
attacgttaatgctcggggccaacgacagcaccattgatctgatgcgtgaaggcgttgat
tgcgtattacgagcctggctgccccatgatgagcaattagcggtgcgtaatattggtcag
caaccgcaaatcacctgtgcgtcaccggcgtatctggcaaaacagggggtgccaacatcg
ctggacgatttggcaggtcatcaagcggtggggtatttctcacgctttcataaccgcgat
tatccgttggagtttgtccagcaggggaaaattgaatcccgcgtattacccggtattttg
agtgtcagtggtgctgatgcctatattgcagccggcgttgcaggtttggggctgattcaa
gcccccactccaggtattcaaagccaattggcacaaggcgagttaattgaaatcctgccc
cactgccctccaccggcgatgccgctgtttatcatgtttccaccagggcgttttttagct
cccagagtcagagtactgattgactggctcgttgagttattcgcccattatcctcccatg
ctacgagataggcagtccggagtataa
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