Yersinia aldovae: AT01_3504
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Entry
AT01_3504 CDS
T03605
Name
(GenBank) bacterial extracellular solute-binding s, 3 family protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
yal
Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yal01011
]
AT01_3504
Enzymes [BR:
yal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AT01_3504
Peptidoglycan biosynthesis and degradation proteins [BR:
yal01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AT01_3504
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
AJJ62001
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All DBs
Position
complement(3835441..3836901)
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AA seq
486 aa
AA seq
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MTRIKLNYFVIGVVALLLALALWPNIPWRNGQEGQLDQIKARGELRVSTISSPLIYATGK
DGPSGLDYELAKRFADYLGVKLVITPRHNIDDLFDALDSNDADMLAAGLIYNSERLNRAR
TGPAYYSVSQQLVYRLGTPRPKSFSDLKGQLVVASGSAHMTALKQLKESKYPDLKWGSSV
DRSGKELLEQVADGKLDYTLGDSVTIALLQRVHPQLAVAFDVTDEEPVTWYFKQGADDSL
YAAMLDFYSDMVEDGSLARLEEKYLGHVGSFDYVDTKTFLSAIDNVLPTFRPLFKKHAGE
IDWRLLAAIAYQESHWNPQATSPTGVRGLMMLTRATASGLGVKDRVDPEESIKGGSTYLQ
RLMKKMPETIPEDEKIWFALAAYNLGYGHMLDARRLTKNQNGNPDSWVDVKMRLPMLSQK
RYYPSTTYGYARGHEAYNYVENIRRYQDSLVGYLQEKEKKAAQSAAIEAELGKAYPVVGP
GWSINN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcgcataaaattaaattactttgtcattggtgtagttgccttacttctggccctt
gcactgtggcccaatattccctggcgtaatggccaggaggggcaacttgaccaaataaaa
gcccgtggcgagctgcgagtaagtaccatcagctctccactgatctatgcgaccggaaag
gatggcccttctggtcttgactatgagctggcaaaacgttttgctgactatctgggggtt
aagctagttatcacccctcgtcataacattgatgatttgtttgacgccttagatagcaat
gacgccgacatgctggccgccgggcttatctataatagtgagcgcctcaaccgggcgcgc
accggccctgcctactattcagtctcgcagcagttggtctaccggctgggaacgccacgg
ccaaaatcattcagcgacctgaaaggtcagttggtggtggcctccggctctgcccacatg
acggcattgaaacagcttaaagagagcaaataccctgatctcaaatggggatcatccgtt
gatcgctcaggtaaagagttactggagcaggtcgcggatggcaaactcgactacaccctc
ggcgattcggtaactattgccttgttacagcgcgtccatccacaattggcggtggctttt
gatgtcaccgatgaagaaccggtcacctggtatttcaagcaaggagcagatgacagcctg
tatgccgcaatgctcgacttctatagtgacatggtggaagacggtagtctggcgcggttg
gaagaaaaatatctgggccatgtgggtagctttgattatgtcgacactaaaaccttcttg
tcggccatcgataacgtgctgccgactttccggccactgttcaaaaagcacgctggggaa
attgactggcgcttactggcggcaattgcctatcaggaatcgcactggaatccgcaagcc
acttcccctaccggtgtacgtggcctgatgatgctaactcgtgcaaccgccagtggcctg
ggggttaaagacagagttgatcccgaggagagtatcaaaggtggttccacatatttacag
cgtttgatgaaaaagatgccggaaaccattcctgaagatgaaaaaatctggttcgcactg
gccgcttacaacctcggttatggccacatgctggatgcccgccgtctgactaaaaatcaa
aacggtaatccagatagttgggttgacgtcaaaatgcgcctgccgatgttaagtcagaag
cgctactaccccagcaccacttatggctatgctcgcggtcatgaagcctataattatgtg
gagaatatccgccgttatcaggacagtttggtagggtatttacaggaaaaagagaagaaa
gcagcgcaaagtgccgcgattgaagctgaactgggcaaagcttatccggtcgtcgggccg
ggttggtcaatcaataattag
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