Yersinia aldovae: AT01_3521
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Entry
AT01_3521 CDS
T03605
Name
(GenBank) beta-eliminating lyase family protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
yal
Yersinia aldovae
Pathway
yal00260
Glycine, serine and threonine metabolism
yal00460
Cyanoamino acid metabolism
yal00630
Glyoxylate and dicarboxylate metabolism
yal00670
One carbon pool by folate
yal00680
Methane metabolism
yal01100
Metabolic pathways
yal01110
Biosynthesis of secondary metabolites
yal01120
Microbial metabolism in diverse environments
yal01200
Carbon metabolism
yal01230
Biosynthesis of amino acids
yal01240
Biosynthesis of cofactors
yal04981
Folate transport and metabolism
Module
yal_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AT01_3521
09102 Energy metabolism
00680 Methane metabolism
AT01_3521
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AT01_3521
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AT01_3521
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AT01_3521
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AT01_3521
Enzymes [BR:
yal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AT01_3521
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
SapB_1
Motif
Other DBs
NCBI-ProteinID:
AJJ64733
LinkDB
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Position
3857263..3858516
Genome browser
AA seq
417 aa
AA seq
DB search
MLKREMNIADYDADLWRAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANVAVYSALLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYADLAAQAEKYKPKMIIGGFSAYSGI
VDWAKMREIADSIDAWLFVDMAHVAGLVAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEDLYKKLNSSVFPGNQGGPLMHVIAGKAVALKEAMEPEFKIYQQQVVKNAKAMVS
VFQERGYKVVSGGTENHLFLLDLVDKDVTGKDADAALGRANITVNKNSVPNDPRSPFVTS
GVRIGSPAITRRGFKEAESRELAGWMCDVLDNINDEATIERIKQKVLAICARLPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgcagatctatggcgtgcaatggag
caagaagtggtgcgtcaggaagagcacattgagctgattgcctctgagaactacaccagc
ccgcgtgttatgcaggcacagggttctcagttgacgaataaatatgctgaaggttatccg
ggcaagcgttactacggtggctgtgagtatgtcgacgtggtagagcaactggctattgat
cgtgctaaagagctgtttggtgccgattacgccaacgttcagccgcattccggttcgcaa
gctaacgtggcagtttactctgctttactgcaacccggcgacactgttctgggtatgaat
ctggcacacggcggccatttaactcacggttcaccggttaacttctccggtaaattgtac
aatatcgtgccttacggtatcgatgaatctggcaagattgattacgccgatttggccgct
caggctgaaaaatataaaccaaaaatgattattggtggcttctccgcctattccggtatc
gttgattgggcaaaaatgcgcgaaattgcagacagcattgatgcatggctgtttgtcgat
atggctcacgtagcaggcctggtggctgcgggcgtataccctaacccggttcctcatgcg
catatcgtgacgactactacgcacaagacattggctggccctcgcggtggtttgattctg
gctaaagggggggatgaggatttgtacaagaaacttaactcatctgttttcccaggtaat
cagggcggcccattgatgcatgttatcgcgggtaaagcggtagcactgaaagaagcgatg
gagcctgagttcaaaatttaccagcaacaagtggttaaaaacgccaaagcgatggtatcc
gtgttccaggaacgcggttataaagtggtgtctggcggtactgaaaatcacctgttcctg
ctggatctagtggataaagacgtcaccggtaaagacgccgatgctgctttgggtcgtgcc
aatatcaccgtgaacaaaaatagtgtacctaacgatccgagaagcccatttgtgacttct
ggcgtgcgtatcggtagccctgctatcacgcgtcgcggcttcaaagaagcggaatctcgt
gaactggctggctggatgtgtgatgtgttggataacatcaacgatgaagcgaccattgag
cgtatcaaacagaaagttctggctatctgtgctcgtttgcccgtttacgcataa
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