Yersinia aldovae: AT01_3741
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Entry
AT01_3741 CDS
T03605
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
yal
Yersinia aldovae
Pathway
yal03030
DNA replication
yal03430
Mismatch repair
yal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT01_3741 (holA)
03430 Mismatch repair
AT01_3741 (holA)
03440 Homologous recombination
AT01_3741 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yal03032
]
AT01_3741 (holA)
03400 DNA repair and recombination proteins [BR:
yal03400
]
AT01_3741 (holA)
Enzymes [BR:
yal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AT01_3741 (holA)
DNA replication proteins [BR:
yal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AT01_3741 (holA)
DNA repair and recombination proteins [BR:
yal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AT01_3741 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
CcdB
Motif
Other DBs
NCBI-ProteinID:
AJJ63544
LinkDB
All DBs
Position
complement(4100768..4101799)
Genome browser
AA seq
343 aa
AA seq
DB search
MIRIYPEQLVTQLHEGLRACYLLCGNEPLLLQESQDHIRHVASQHDFSEHFSVTLDAHTE
WDTIFSLCQALSLFASRQTLLLNFPESGLTAPMNEQLVKLSSLLHPDILLILRANKLTKA
QENSAWFKALSKNGVLVSCQTPEQTQLPRWVSARAKLLNLEVDDAATQLLCYCYEGNLLA
LSQALERLSLLYPDGKLTLPRVEQAVNDAAHFTPYHWLDALLAGKSKRAWHILQQLQLEE
SEPVILLRTLQRELLLLLTLKRRMDQVPLRSLFDQFKVWQNRRPMMTQALQRLTLQQLQQ
AVHLLTRMEIRLKQDYGQSIWPELETLSMLMCGKTLPESFFDA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaatttaccctgaacaacttgtcacgcagctccatgaggggctgcgtgcttgt
tatctgttatgtggcaacgagccattgctgttacaggaaagtcaggaccacattcgccac
gttgcgtcacaacacgattttagcgagcatttcagcgttacattggatgctcacaccgaa
tgggacactatctttagtttatgtcaggcgctgagtttatttgccagtcgccagacactg
ctgcttaacttcccagaaagtggcttgaccgccccaatgaacgaacagttagtcaaatta
tccagtttgttgcatccggatattttgttgattttacgcgccaacaagctgaccaaagca
caggagaacagtgcctggttcaaagcccttagcaagaatggcgtattggtcagttgccag
acgccggaacagactcagcttccccgctgggtaagtgcccgcgccaagctcctcaacctg
gaagtcgacgatgccgcaacacagctactttgttactgctacgaaggtaacttgctggcg
ctatcacaggcattagagcggttgtcactgctctaccctgacggcaaactgacgctgccc
agagtggagcaagcagtcaatgacgcagcgcatttcacgccttatcactggctggatgca
ttgctggcgggcaagagcaaacgtgcatggcatattttgcaacaactgcaactagaagag
agtgaaccggttattttgctgcgcaccctacagcgtgaactgctattactgctcacactt
aagcgccggatggatcaggttccattacgatctttgtttgatcaatttaaggtctggcaa
aatcgtcgtccaatgatgactcaagcgctgcaacgtcttacgctgcaacaactgcaacaa
gcggttcatttgctaacacgaatggaaattcgcctgaaacaggattacggtcaatcaatc
tggcctgagttagaaaccttatctatgctgatgtgtggaaaaacattacctgagagtttt
tttgatgcctaa
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