Yersinia aldovae: AT01_3789
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Entry
AT01_3789 CDS
T03605
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
yal
Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yal03400
]
AT01_3789
Enzymes [BR:
yal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AT01_3789
DNA repair and recombination proteins [BR:
yal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AT01_3789
Prokaryotic type
AT01_3789
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AJJ62014
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All DBs
Position
4152255..4153712
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AA seq
485 aa
AA seq
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MATHLVWFRNDLRITDNLALNAACQDPQARVIALFIATPKQWAAHDMAPRQAAFLQQNLQ
LLQSALAAKSIALHYHQCDDFQDAVIWLDNFCQQQQVDALFYNQQYELNERRRDEALAVR
LNSGANGRNITCHRFHDSLLLPPGSVLTGNNEMYKVFTPFRRAFIQRLLMSDNACVPAPM
ARDNMAAATSFPPLLFDYPQQPVDPILFPAGEDAALQRLRSFCREQVQDYHQQRDFPAVS
GTSCLSPYLALGVLSPRQCFNRLRAECPAGLENPDSGAFTWLNELIWREFYCHLLVAYPR
LCQHHPFIGWTDAVIWNHSELQLTAWQQGRTGYPIVDAAMRQLNETGWMHNRLRMISASF
LVKDLLIDWREGERYFMAQLIDGSLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDK
DGAFIRRWLPELAAVPDSDIHQPWRWADRQQRHLDYPLPLVDHKLARLATLAAFETAKRD
VRKDP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcatctggtctggtttcgtaatgacttacgtatcactgataatctggcgctg
aatgcggcgtgtcaggacccacaagcaagggtcattgcgctgtttattgccacgcctaag
cagtgggccgcacatgatatggcaccgcgtcaggcggcatttttgcagcaaaatctgcaa
ctgttgcagagtgctctcgctgcgaaaagcatagcgctgcattatcatcaatgtgatgat
tttcaggatgcagttatctggttggataacttctgccagcagcaacaggtcgatgcacta
ttttataatcagcagtatgaattgaacgaacggcggcgggatgaggcattggcggtgcgg
ctcaacagtggagcgaacggtagaaatatcacctgccaccgttttcatgacagcttatta
ttgccgccaggcagcgtcctgaccggtaataacgaaatgtataaagtgttcacgccattt
cgccgcgcttttatccaacgattacttatgagcgataacgcatgtgttccggcaccgatg
gctcgcgataacatggctgccgcgacatcattccccccgctcttatttgattatccgcaa
cagccggttgaccctattttgttccccgccggtgaagacgcggcactgcagcgtttgcgc
agtttctgtcgtgagcaggtacaagattatcaccagcaacgtgatttccctgcggtgtca
ggtaccagttgcctgtcaccttatctggcgctcggcgttttatcaccacgtcagtgcttt
aaccgcttgcgtgcggagtgcccggccgggctggaaaatccagacagcggcgctttcacc
tggcttaatgagcttatctggcgtgagttctattgccatttgttagtggcctatccgcgt
ttatgccagcaccatccctttatcggctggactgatgcagtaatatggaatcactcggaa
ctgcaattaaccgcctggcagcaggggcgcacagggtatcctattgttgatgccgctatg
cggcagttgaatgaaaccggttggatgcataaccgcctgcggatgatcagtgccagcttt
ttggttaaagacttattgatcgactggcgtgagggtgagcgctattttatggcgcaatta
atcgacggctcactggccgccaataatggtggctggcagtgggcggcttcaacgggtact
gatgcggctccctattttcgtatttttaatcccaccacgcagggagagcgctttgataaa
gacggcgcttttattcgccgttggctgccagaactggctgcggtacccgacagtgatatc
catcagccgtggcgttgggccgatcggcaacaacggcatttggattacccactgccgctg
gtggaccataagctggccagattggctacactggcggcatttgaaaccgctaagcgggat
gttcgtaaggacccctaa
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