Yersinia aldovae: AT01_4039
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Entry
AT01_4039 CDS
T03605
Name
(GenBank) helix-turn-helix domain protein
KO
K27259
AraC family transcriptional regulator, pdu and cob operon regulator
Organism
yal
Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yal03000
]
AT01_4039
Transcription factors [BR:
yal03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AT01_4039
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PocR
HTH_AraC
HTH_18
Motif
Other DBs
NCBI-ProteinID:
AJJ61990
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Position
4411222..4412124
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AA seq
300 aa
AA seq
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MISASSLNSELINKIAQDFAQATGLAVVVVNIHGEEISDLFNFTPFCQLMRQDPVNHLRC
RMSDRCGGLEASKSNEPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLHSDVYLIDIL
NVDNHWQQNPALMDEFQNVPVMDFSRVIASADLLKLIVENCLKKHLNFVVINDNMGSKEP
GRIRPVPPHDSKMKKALRYIDTHLSEELRLEEVAAKVYLSPYYFSKLFKKYQGIGFNAWV
NQQRMANAREMLQHSDWSIASIAKNLGFSQTSYFCKVFRQTYNVTPQVFRSLSSERREME
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgccagttctcttaactcagagctcataaataaaatcgcgcaggattttgct
caggccacagggctggccgtggtggtagtgaatattcacggcgaagagatttctgatctt
tttaactttacgccattttgtcagttgatgcgccaggacccggtgaaccatctccgttgc
cgaatgagtgatcgttgcgggggtcttgaagcttcaaagtccaatgagccttgtatttat
cgctgccacgctgggttaactgatttctctattccgctggttattgccggtcatttagtg
ggttttgtgttatgcggccaggtgcggttgcactcagatgtttatctgattgatatactt
aatgtcgataatcactggcagcagaatccggcactgatggatgagttccaaaatgtgcct
gttatggatttttcacgggtgattgcatcggcagatttattgaagttgattgttgagaat
tgcctcaaaaaacatctcaattttgtggtgatcaacgacaacatgggtagcaaagaaccg
ggcagaatacgaccggttcccccccatgacagcaaaatgaagaaagcactgcgttatatt
gatacacatttatcggaagaactacggctggaagaagtggcggctaaggtgtatctcagc
ccgtactacttcagcaaattgtttaaaaagtatcagggcatcggatttaatgcctgggtc
aatcagcagcggatggccaatgccagagagatgttacaacacagcgattggagcattgcc
agcattgccaaaaatctgggtttttcccagaccagctatttctgcaaagtgttccgtcag
acctacaacgtgacgccgcaggtatttcgctcactttcttctgaacgcagagaaatggaa
tga
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