KEGG   Yersinia aldovae: AT01_4071
Entry
AT01_4071         CDS       T03605                                 
Symbol
clpV
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
yal  Yersinia aldovae
Pathway
yal03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yal00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AT01_4071 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yal02044]
    AT01_4071 (clpV)
Secretion system [BR:yal02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AT01_4071 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_7 Sigma54_activat AAA_22 Clp_N AAA_25 AAA_14 nSTAND3 NACHT NBD_SMAX1 TniB Zeta_toxin RuvB_N Sld3_STD PALB2_WD40 Torsin MAT1
Other DBs
NCBI-ProteinID: AJJ63118
LinkDB
Position
4442973..4445642
AA seq 889 aa
MAITRKNLFGKLDATLFKGIESATTICKLRGNPYVELVHWVNQLWHQEDNDLKHIIRYFA
VDVDAFERGLAQALARLPVGATSISDFSYHIELAIERAWVYASLECLDTRIRSGHLLLAM
LTNMELRRALFTIAPEMEKIPLEHLSSDFNFITQTSPEANEAATDGSPMYDGALPGEASN
AIGGKSTATLAQYTTDLTALAREGKIDPVLGRNHEISTMVDILLRRRQNNPLLTGEAGVG
KTAVVEGLALAIAAGEMPPALSQVSLLTLDVVALSAGASMKGEFEARLKNVLDEAMASPT
PVILFIDEVHTLVGAGGNAGTGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTR
RFQVLQVDEPDENTAISMLRGLTPALEKHHGVWIMDEALQAAVRLSHRYIPARQLPDKAI
SLLDTACARVAVAQFSQPAELQQLTFQSETAQTELSSLEKARHFGKEQGDRAEQLQAMIA
QHSEAASKLDQRWQAERELVAAITTTRSDLYELVSQPTVDEEKRQQHQQQLAQLEEQLLQ
VRSVQPLVQAEVNATVIANIVADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQPHALVQ
LSENIMTARAGMADPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNLITINMSEYQE
SHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFDKGQM
EDGEGRFIDFKNTILLLTSNVGSELLSNLLADPDTAPDQDGILSALQPELLKVFPAAFLG
RVTVIPYLPLQQSALQHIVRLHLDRIGERLQSQHQLTLQYSDEVVDDVVSRCSVAETGAR
MLIRYIEQNITPEIGKFILRDHDAKPNQIVFVDKSEKKFTVSVLNENGK
NT seq 2670 nt   +upstreamnt  +downstreamnt
gtggctattacaaggaaaaaccttttcggcaagctggatgccactcttttcaaaggtatt
gaaagcgcgactacgatttgtaaattacgtggcaacccttatgtagagttagttcactgg
gtgaatcaactctggcaccaggaagataacgaccttaaacatattattcgttattttgct
gtggatgtagacgcttttgagcgtggtttagctcaagcgctggcccgtctgccagttggc
gcgaccagcatctcagatttttcataccatatcgaattagctattgagcgggcatgggtg
tacgccagcctggaatgtttagacacacgcattcgtagcggtcatctgttgttggcaatg
ctaaccaatatggaactgcgccgggcactgtttacgattgcaccagagatggaaaaaatt
cctctggagcatttaagtagcgattttaactttattacacagacatcgccggaagcgaat
gaagcggccaccgacggtagtccaatgtatgacggtgcattacccggcgaggccagcaat
gcgattggcggcaaaagcacagcaaccttggcgcagtacacaacagacctgactgcatta
gcccgcgaaggcaagatagacccggtgctggggcgtaatcatgaaatcagcacgatggtg
gatattttgctgcgccgtcggcaaaacaacccgctgctgaccggtgaagctggcgtgggt
aaaacggcggtagttgaaggtctggctctggctattgcagcgggtgaaatgccgccagca
ctgagtcaagtaagcctgttgacgttagatgttgtagccctctctgccggtgccagcatg
aaaggcgagtttgaggcccgtctgaagaatgtgttagacgaggcgatggcttcacccaca
ccggtaatcttgtttatagatgaagtccacactctggtgggggcgggcgggaatgcaggc
accggtgatgccgcaaacctactcaaaccggccttggcgcgtggtcagttacgtaccatc
ggtgctacgacgtggagtgagtttaaacgccatattgaaaaagatccggcgctaacgcgt
cgtttccaggtgcttcaggtcgatgaacctgatgagaatactgcaatctccatgctgcgt
gggctgacaccggcgttagagaagcatcatggcgtgtggatcatggatgaagccttgcaa
gcagcggtacggttatcgcaccgttatatccctgcgcgccagttgccggataaagcgatt
agtctgcttgataccgcctgtgcacgcgttgctgtcgcacaattctcacaaccagcagaa
ttgcagcaactgacattccagagtgaaacagcacaaaccgagctgtcgtcgctggaaaaa
gcgcggcactttggtaaagagcagggcgatcgtgctgagcagttgcaagcgatgatagcc
cagcattcagaagctgcaagcaagcttgaccaacgttggcaggcagagcgagagttggtc
gccgcgattaccactacgcgaagtgatctgtatgaactggtttcacagccaacagtggat
gaagaaaagcgccagcagcatcagcagcaattagcacagctagaagagcagcttttgcag
gttcgtagcgtacagccattggtgcaagctgaagttaacgcaaccgtgattgccaatatc
gttgcagactggaccgggattcaggttggacaaatgctgaaagacgatattcgtgcggtg
atggaactgccgcaacgtcttgaagaacgtgttattggtcagccacatgcgttggtgcag
ttgagtgaaaacattatgaccgcgcgtgccggcatggcagacccaagaaaaccgctgggc
gtctttatgctagttggcccgtctggtgtgggtaaaacagaaacggcattggccattgct
gaaagtatgtatggtggtgagcagaatcttatcactatcaatatgagcgaatatcaggaa
tcacacacggtttcctcattaaaaggctcaccaccgggctacgtgggttatggcgagggc
ggtgtattaactgaagctgtacgtcgtaaaccatatagtgtggtgctgttagacgaaatt
gaaaaagcgcattcagatgtacatgaattgttcttccaggtatttgataaaggtcagatg
gaagatggtgaagggcgctttatcgattttaaaaataccattttgttgttaaccagtaat
gtcggcagtgaattgttaagtaacttattagcggacccagataccgcgccggatcaggat
ggaatattaagtgctttacaaccggaattactgaaagtgttcccggccgcatttttaggt
cgcgtcactgtgattccttatttaccgctacagcaaagtgcgttgcagcatattgttcgg
ttgcatttggatcgtattggcgaacgtttgcagtcacagcatcagctcaccttgcaatac
agcgatgaggtcgttgacgacgttgtaagccgttgttcggttgcagaaacgggtgcacgt
atgttgattcgttatattgaacagaatattacaccagaaattggtaagtttattttacgc
gatcacgatgctaagcctaatcagatcgttttcgttgataaaagtgagaagaaatttaca
gtttctgtgttgaatgaaaatggtaaataa

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