Yersinia aldovae: AT01_469
Help
Entry
AT01_469 CDS
T03605
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
yal
Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yal03016
]
AT01_469 (rnb)
Enzymes [BR:
yal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AT01_469 (rnb)
Transfer RNA biogenesis [BR:
yal03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AT01_469 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AJJ62995
LinkDB
All DBs
Position
502582..504516
Genome browser
AA seq
644 aa
AA seq
DB search
MFQDNPLLAQLKQQLHTQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
IATLHTDKDREIAEPETLVEPFLSRFVGRVQRKDDRLSIVPDHPLLRDSIQCRPVRELTH
DFQNGDWAVAEMRRHPLKGDRAFNADLTAFITDGEDHFVPWWVTLARHNLEREAPMMVES
ALHGTELEREDLTALNFVTIDSNSTEDMDDALYVEDQGDGSLLLTIAIADPTAYVDENSE
LDLIARKRAFTNYLPGFNIPMLPRDLSDNLCSLRPNQRRAVLVCRVTIAVDGALGEDIRF
SAAWVESKAKLVYDEVSDWLDGNPGWQPPDADIAEQVMLLKRVCDARSRWRQQHALVFKD
RPDYRFVLGDKGEVLDIIVEHRRIANRIVEECMIAANVCAAIALRDNLGFGIYNVHTGFD
PALVEQAATVLQANGVEADPQALLTLPGFCELRRHLDALPTQFLDSRIRRFQTFAEISTT
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIISGQQAEKPQDEITLQLAERRRLNRM
AERDVGDWLYARYLQPQAGTDTRFAAEIIDVTRGGLRVRLLDNGAVAFIPAPFIHAVRDE
MVCSQETGTVQIKGETVYSQNDKIEVRIAEVRMETRNVVARPVV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctggcgcagctaaaacagcaacttcacactcagaccccg
cgcgttgaaggcgtggttaaagggactgagaaaggctttggctttcttgaggtagatggg
cagaaaagttactttattccgccaccacagatgaagaaagtcatgcatggcgatcggatt
attgccactttgcataccgataaagatcgtgagattgctgagccggaaacactggttgag
ccatttttatcgcgctttgttggtcgggtgcagagaaaagacgatcgtttatcgatcgtg
cctgaccaccctttgctacgtgattccattcaatgtcgtccggtgcgtgaactgacgcac
gacttccagaacggtgattgggcggtggcagaaatgcgccgccacccgttaaaaggtgat
cgggcttttaatgctgatctgactgccttcatcaccgatggcgaagaccatttcgtcccg
tggtgggtcacactggcgcgccataatctggagcgtgaagctcccatgatggtcgagtct
gccttacacggcactgagcttgagcgtgaagacctgactgcgctgaactttgtcactatc
gacagcaatagcaccgaagatatggatgatgcgctgtacgtggaagaccaaggtgatggt
tctctgctactgaccattgctatcgccgatccgacagcttatgtcgatgagaacagtgag
ttggatttaattgcccgcaaacgcgcgttcaccaactatctgccgggctttaacatcccg
atgctgccacgcgacttgtccgataacctctgctctttgcgccctaaccaacgcagggcg
gtgctggtttgtcgcgtaaccattgccgtcgatggtgccttgggtgaggatattcgcttc
tcggcggcgtgggttgagtcaaaagccaagctggtttatgacgaagtgtccgactggctg
gatggcaatccaggctggcagccgcctgacgcggatattgccgagcaagtcatgctgcta
aaacgggtgtgtgatgcgcgcagtcgctggcgtcaacagcacgctctggtgtttaaagac
cgccctgactatcgctttgtgctcggtgacaaaggcgaggtgctggatatcattgttgaa
catcgccgcatcgccaaccgtattgttgaagagtgcatgattgccgctaacgtctgcgca
gcaattgccctgcgtgataatcttggctttgggatttataacgtccataccggctttgat
ccagcgctggttgaacaagccgcgacagtgctacaagccaatggggttgaggccgatcca
caagcgctgctcacgctgccgggtttctgcgagttacgccgtcatcttgatgcgctgcca
acccagttccttgatagccgcattcgtcgcttccagaccttcgctgaaatcagtaccacc
ccggggccacatttcggtctggggcttgaggcttatgcaacctggacctcgccaattcgt
aaatatggcgacatggttaatcaccgtctgctcaaagccatcattagcggccagcaggca
gagaagccacaggatgagataacccttcagttggcagaacgtcgccgcctgaatcgtatg
gctgaacgtgatgtcggcgactggctatatgcccgctatctgcaaccacaagcgggcacc
gatacccgtttcgcggcggaaattattgatgttacccgtggcggcctgcgtgtgcgttta
ctggataacggcgcagtggcctttatcccggcaccgttcattcatgcggtgcgtgatgaa
atggtatgcagccaggaaaccggcacggtgcagatcaagggtgaaacagtttacagccag
aacgacaaaatagaggttcgcattgccgaagtgcggatggaaacccgtaatgtggtggcc
cgcccggtggtctaa
DBGET
integrated database retrieval system
