Yersinia aldovae: AT01_534
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Entry
AT01_534 CDS
T03605
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
yal
Yersinia aldovae
Pathway
yal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT01_534 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yal03400
]
AT01_534 (xth)
Enzymes [BR:
yal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AT01_534 (xth)
DNA repair and recombination proteins [BR:
yal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AT01_534 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AJJ64630
LinkDB
All DBs
Position
573521..574327
Genome browser
AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYHGQK
GHYGVALLTKQEPLAVRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRDHPT
KFPAKERFYADLQHYLEQQLSADAQVLIMGDLNISPTDLDIGIGEESRKRWLRTGKCSFL
PEERAWLERLQNWGLVDTFRAANPDCNQQFSWFDYRSRGFDENRGLRIDLLLASQPLAAR
CIATGIDYDIRSMEKPSDHAPVWSEFAL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtttcttttaatatcaatggcctacgtgcaagacctcatcaactagcggct
ataatcgagcaacaccagcccgatgtcattggtcttcaggaaacaaaggtgcatgacgat
atgtttcctctggaagacgttagccaacatggttatcacgtattttatcatgggcagaaa
ggccattacggtgttgcgttactgacaaagcaagagcctttagcggtgcgtcgtggtttc
cctaccgatgaagaagatgctcaacgtcggattattatggcggatatcgctacaccgcaa
ggtccattaacggtcattaatggctacttcccgcaaggggaaagtcgcgatcaccccact
aagtttccagctaaagagcgtttttatgcagatttacaacattatctggaacaacaactt
tctgccgatgcgcaagtgctgattatgggtgatttaaatatcagcccgaccgatctggat
atcggtattggtgaggagagccgtaagcgctggctgcgtaccggtaaatgctcattcctg
ccagaagagcgggcatggctggaacgcttacaaaattggggcctggttgatactttccgc
gcagcaaatcctgattgtaatcagcagttttcatggtttgattaccgttcacgcgggttt
gatgaaaacaggggcttacgcatagatttattgctagccagccaaccgctggccgctcgc
tgcattgccacagggattgattacgatattcgcagcatggaaaaaccgtcagaccacgcg
ccggtatggtctgaattcgcgctctga
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