Yersinia aldovae: AT01_801
Help
Entry
AT01_801 CDS
T03605
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase dbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
yal
Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yal03009
]
AT01_801 (dbpA)
Enzymes [BR:
yal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AT01_801 (dbpA)
Ribosome biogenesis [BR:
yal03009
]
Prokaryotic type
rRNA helicases
AT01_801 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Helicase_C_2
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AJJ64309
LinkDB
All DBs
Position
complement(834410..835792)
Genome browser
AA seq
460 aa
AA seq
DB search
MSTMSFSSLTLPAEQLSNLNELGYTEMTPVQAAALPAILNGQDVRAKAKTGSGKTAAFGI
GLLDKIAVGEFVTQALILCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGHQLDSL
VHAPHIVVGTPGRIQEHLRKKTLVLDELKILVLDEADRMLDMGFTDAIDDVIAYTPVQRQ
TLLFSATYPAGIERISARVQREPLNVEVDDGDEEPAIEQVLFETTREKRLPLLISVLSHY
QPDSCVVFCNTKKDCQSVYEALESRGISVLALHGDLEQRDRDQVLVRFANHSCRVLVATD
VAARGLDIKDLALVVNFELAFDPEVHVHRIGRTGRAGMSGLAVSLCTPQEMTRAHAIEDY
LQIKLKWTSAEQISRSTNTMPEPEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAADVGK
IDMFPVHAYVAIRKASAKRALQQLQQGKIKGKNCKARLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacaatgtccttttcttccctgacactgcctgctgagcagttgtctaatctaaac
gaacttggctataccgagatgacaccggtacaggccgcggcattacccgccatcctcaat
gggcaggatgtgcgggcgaaagctaaaaccggcagtggcaaaaccgccgcattcggtatc
gggctgctcgacaaaatcgcggtgggggagtttgttacccaggcgctgattctatgcccg
actcgcgaactggcagaccaggtcagtaaagagttacgccgtttagcgcgctttactcaa
aacattaaaatcctaacactgtgcggcggccaaccgatgggccaccaattggattctctg
gttcatgcgcctcatatcgtcgtgggtacaccagggcgcattcaggagcacctgcgtaaa
aagacactggtactggatgaactgaaaattctggttttagacgaagctgaccgcatgttg
gatatgggttttaccgatgccattgacgatgtgattgcttacacccctgtgcagcgccag
actttactgttctctgccacctatccggcaggtattgagcggatcagcgccagagtgcag
cgtgaaccgctgaatgttgaagtcgatgatggtgatgaagagccggcaattgagcaggtg
ctgtttgaaaccacccgtgagaaacgcttaccgctgctgatttcagtattaagccattat
cagccagattcttgcgtggtgttctgtaacaccaaaaaagactgccagagcgtttatgag
gctttggaatcccgtggtatcagtgttctggccttacacggtgatttggaacaacgcgat
cgcgatcaggtattagtgcgttttgctaaccatagttgccgggtattggttgcaaccgat
gttgctgcccgtggtctggatatcaaagatttagcgctggtggttaactttgaactggcg
ttcgatcctgaagtgcatgttcaccgtattggtcgcactgggcgagcagggatgagcggc
ctggccgtcagcctgtgtacgccacaagagatgacccgcgcccatgccattgaagattat
ctgcaaattaaattgaagtggacttccgcagagcagattagccgcagtaccaacaccatg
ccggagccggaaatggtgacgctgtgtattgacggtgggcgtaaagccaagatccgcccc
ggtgatattctgggtgctttaaccggtgatgcaggcttgacggcggcagatgtaggtaaa
atcgacatgttcccggtccacgcctatgttgctattcgcaaagccagcgccaaacgagcc
ttacaacagttgcagcaaggtaagatcaaaggcaaaaattgcaaagcccgtttacttaaa
taa
DBGET
integrated database retrieval system
