KEGG   Yersinia aldovae: AT01_930
Entry
AT01_930          CDS       T03605                                 
Symbol
helD
Name
(GenBank) helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
yal  Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:yal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yal03400]
    AT01_930 (helD)
Enzymes [BR:yal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AT01_930 (helD)
DNA repair and recombination proteins [BR:yal03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AT01_930 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_12 AAA_30 DEAD
Other DBs
NCBI-ProteinID: AJJ64162
LinkDB
Position
complement(965694..967748)
AA seq 684 aa
MELKATSFGKHLAQHPYNRVRLLNAGIEVCGDKHQYLIPFNQLVNIQCKRGIVWGELEFE
LPEQQVVRLHGTEWQETLRFYQHLVGIWQQWSEEMSQVCAAVLHKQVESIKRIEQQDKWF
KRSELGQLQAAIREAFGALPLPAQRLTEFESCRADYEQCLSWLQQGNRSVERRNQLWADR
VLVEYQDFFQQVETSPLNESQRRAVVNGEDSVLVLAGAGSGKTSVLVARAGWLLRRNEAL
PEQILLLAFGRQAADEMNSRIKQRLAVDDIQAKTFHALALQIIQQGSRKTPVISKLESDS
QARRSLLITHWQQQCSEKKAQAKGWREWLTDELEWEIDEGNFWQDKRLAARLAGRLERWL
GLMRMHGGSQAEMIEQADDEVRDLFQKRIRLMAPLLKAWKAALKEEGAVDFSGLIHQAVN
LLEKGRFVSPWKHILVDEFQDISPQRAMLLAALRKQNKQTSLFVVGDDWQAIYRFSGAEL
SLTTSFSENFGESAECALDTTYRFNDRIGDIANRFIQQNPYQLKKPLNSLSKGSKKSVVV
LPHEQLEALLDKLSGFVKDDERILILARYHHLRPEILQKAATRWPKLAIDFMTIHASKGQ
QADYVIIAGLHEGSDGFPAVARESVLEEVLLPAPEDFPDAEERRLLYVAITRARHQVWLL
QDTRRPSCFVEQLSELGVPVQRKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaacttaaagcgacatcctttggcaaacatctggctcagcatccctataaccgggtt
cgcttgctcaatgcggggatcgaggtctgtggtgataaacatcaatatctgatccccttt
aaccaactggtcaatattcaatgtaaacgcggtatcgtctggggcgagttagagtttgaa
ctgcctgagcagcaggtcgtgcgcttgcatggcactgaatggcaggagactctgcgtttc
tatcagcatttggtggggatttggcagcaatggagtgaggagatgagccaggtttgtgcg
gcagttttgcataaacaagtggaatcaattaagcggattgagcaacaagataaatggttt
aaacgcagtgagctgggccaattgcaagcggctatccgagaggcgttcggggcattaccg
ttgccggcgcagcggctaacggaatttgaatcttgtcgggcggattacgaacagtgcttg
agctggttgcagcaaggcaaccgaagcgttgagcggcgtaatcagttgtgggctgatcgt
gtgctggtggagtatcaggacttcttccagcaggtagaaacatcaccacttaatgaatcg
cagcgtcgggcggtggtgaacggtgaagattcggtattggtgctggcaggtgccgggagc
ggtaagacatctgtgctggtggcccgagcaggttggttgctacgccgtaatgaggctctc
cctgaacaaatcttattattggcctttggccgccaggcggcggatgaaatgaatagccgc
attaagcaacgtttggccgttgatgatattcaagccaaaactttccatgcattagcattg
cagataattcagcaaggtagccgcaaaacaccggtgataagcaaactggagtctgatagt
caggccagaaggtcgctgctgattacacattggcagcagcaatgtagcgagaagaaagca
caagccaagggctggcgtgaatggctcaccgatgagttggagtgggagatagacgagggc
aatttctggcaggataagcgcctggcggccagattggcagggcgattggagcgctggctt
gggctgatgcggatgcacggggggagccaggcagaaatgattgaacaggctgatgatgaa
gtgcgtgacctgttccagaaacgtatccggctgatggcaccgctattaaaagcatggaag
gccgcgcttaaagaagagggtgcggttgatttctccgggctgatacatcaagcggttaac
ctgttggaaaaagggcgttttgtcagcccgtggaagcatattttagtggatgagtttcag
gatatctcgccacagcgcgcaatgttacttgcggcattgcgcaagcaaaacaaacaaacg
agcctgtttgtcgtgggcgatgattggcaagcgatttaccgtttcagcggcgcagagctt
tcgctaaccacctcttttagtgagaactttggtgagagtgccgaatgtgccttagatacc
acttatcgctttaatgacagaattggtgatattgccaaccggtttattcagcaaaacccc
tatcaactgaaaaaaccgcttaacagcctgagcaaaggcagtaaaaagtcagtggttgtc
ttgccgcatgaacagcttgaagcgttgctggataagctgagtggttttgttaaagatgac
gaacgtatcctgatattggcgcgttatcatcacttacggccagaaatcctgcaaaaagca
gcaacacgttggccgaaattagccattgattttatgactattcatgccagtaaagggcag
caggcagattatgtgattattgccgggttacatgaagggagtgatggattcccggctgta
gcgcgcgaatccgtattggaggaggtgctgctacctgccccagaagatttccctgatgcc
gaagagcgacgtttactttatgttgccattacccgtgcccggcatcaggtgtggttactg
caagacaccaggcggccatcgtgttttgttgagcaactcagtgagttgggcgttccagtt
cagcgtaaaccctag

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