Yersinia aldovae: AT01_955
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Entry
AT01_955 CDS
T03605
Name
(GenBank) L,D-transpeptidase catalytic domain protein
KO
K21470
L,D-transpeptidase YcbB
Organism
yal
Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yal01002
]
AT01_955
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yal01011
]
AT01_955
Peptidases and inhibitors [BR:
yal01002
]
Cysteine peptidases
Family C82
AT01_955
Peptidoglycan biosynthesis and degradation proteins [BR:
yal01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AT01_955
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AJJ61498
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Position
complement(1001044..1002906)
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AA seq
620 aa
AA seq
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MSIRKTNLALYCTLICSMISVFTASATTPVMPVDSSSALPMQGATLSVAQSRSQLLAVLP
KNIAPFYSSELALLYGANAMQPMWQDHVAVQHFQQQLAEVALSGIQPQFMQWVKWLSDPE
ITGMARDVILSDAMLGYLQFVSGVGANGSIWLYSNVPYKMAMPPVTILNRWQQAVREGST
AAYLASLAPQHPQYEKMHLALKPLLADRRPWPLMSNGPSLRPGQLSDDIPALREILGRNG
MLQPVVATPVKAPEVIPVDNPAVAAVNDDLSVDEEKSRAQAHSLVVSPSAAPVTDVPVTK
GIVSPSTAPLITTTPITDNVYTPELVAAVKRFQQWQGLTDDGVIGVRTREWLNVSPQTRA
TLLALNIQRLRILPGHVDNGIMVNIPNYSLNYYKNGTQVLSSRVIVGRPSRKTPLMSSAL
NNVVVNPPWNVPTSLVRQDIVPKARYDSGYFQRHGYTVLSGWSNDAQVVDPSMIDWSMIS
PNNFPYRLRQAPGSSNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKAS
DLANMLLQDAGWNDARVSSTLKQGDTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYN
YDKTVRSGAQISHQAELLLQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcagaaaaacgaatctagcgctgtactgcacattaatttgtagcatgatatcg
gtatttaccgcctccgcgactacgccagtcatgcctgtagattcatcatcagcgctgcca
atgcagggggccactttgtctgtggcgcagagccgttcacaattgctggctgttttgccg
aaaaatatcgcgccattctactcttctgagctggcattactgtatggcgcgaacgcgatg
caaccaatgtggcaagatcatgtggcggtacagcattttcagcaacagttagccgaagtt
gcgctttccggtatccaaccgcaatttatgcaatgggttaaatggctgagtgaccctgaa
atcaccggtatggcacgcgatgtcattttatctgatgccatgctgggttatttgcagttt
gtctcgggtgtcggtgccaacggtagcatctggttatacagtaatgtgccttacaaaatg
gccatgccaccagtgacgattttaaatcgctggcagcaagctgtacgtgaaggttctact
gccgcttatctggcgtcgttggctcctcagcatccgcaatacgaaaaaatgcatctggca
ttgaaaccactactggccgaccgtcggccgtggccactgatgtctaatgggccaagccta
cgtcctggccagttaagtgatgatattcctgcgctgcgtgaaattctgggccgaaacggt
atgttacaacccgtagtagcaacaccggtaaaagcgccggaggttatcccggttgataat
cctgcggtcgctgcggttaacgatgacttgtcggttgatgaagaaaaaagtcgtgctcag
gcacacagcctggtggttagcccgtctgcggcaccggttacggatgtgcctgtgaccaaa
ggtattgtctcaccgtccaccgcgcctctgatcactaccacgcctattaccgataacgtc
tataccccagagttggtggcggctgttaaacgcttccagcaatggcaagggctaaccgat
gatggcgttattggtgtacgcacccgtgagtggctgaatgtctcgccacaaactcgggca
acattattagcgctgaatattcagcggttgcgcattctgcccgggcatgttgataacggc
attatggttaatattccaaactattcgctcaattattataaaaatggcacacaggtgctt
tcatctcgagtgattgttggccgcccaagccgcaaaacaccgctgatgagcagtgcgttg
aataatgtggtggttaacccgccgtggaacgtgccgacctccctggtgcgtcaggatatt
gtgccgaaagcacgctatgactcaggttattttcagcgacatggctatactgtgttatcc
ggctggagtaatgatgcccaagtggttgatccttcaatgattgactggagcatgatttca
ccgaacaacttcccttatcgcctgcgtcaggcaccaggttccagcaattcattagggcgg
ttcaagttcaatatgccaagctctgatgccatctatttgcatgacactccgaatcatggc
ttgttccagaaggatattcgcgccctcagttcaggctgtgtgcgggtcaacaaggcgtca
gatttggccaatatgctattacaggacgctggctggaatgatgcgcgggtttcgtcaacg
ctaaaacagggtgataccacctacgttaacatccgtcagcgtattccggtgcaattgtat
tacctgaccgcatgggtggctgaagacggcaaaccgcagtttagaacagatatttacaat
tatgataagacggtgagatcgggtgcacaaatctcacatcaggccgagcttttactgcaa
taa
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