Salipiger sp. CCB-MM3: AYJ57_00310
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Entry
AYJ57_00310 CDS
T04443
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
yan
Salipiger sp. CCB-MM3
Pathway
yan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
yan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AYJ57_00310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yan03000
]
AYJ57_00310
Transcription factors [BR:
yan03000
]
Prokaryotic type
Helix-turn-helix
Other families
AYJ57_00310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
GAF
AAA_2
AAA
Mg_chelatase
AAA_16
MCM
bpMoxR
UPF0175
AAA_3
Motif
Other DBs
NCBI-ProteinID:
ANT58938
UniProt:
A0A1B1PK38
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All DBs
Position
1:58367..60073
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AA seq
568 aa
AA seq
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MPAGRGAAERHALDAVFEIAKSFATAPDPIDVVPDILNVLSSFLDLRHGVLALLAEPGSA
PPPGTVNPYHIAATAFVHDESMPIAEVIPDKVVQMVFRSGVTLVSFDLADEYGPDAVPTR
LRDCGQTLVAVPLRDPERSQFVLGVLCAFRSHDSDLTGASDLDVRVMTMVAALLEQALRF
RRRIARDRERALTDTRRMLQSVTDGRTRQRPPVNIDGIVGDSPAIADVIAQVKRVAGTRA
PVLLRGESGTGKELFARAVHTASDRARGPFVRVNCAALSETLLESELFGHEKGAFTSAGA
LKKGRFELADKGTLFLDEIGEISPAFQTKLLRVLQEGEFERVGGTKTIKVDTRIVAATNK
DLERSVAEGSFRADLYFRICVVPIVLPPLRDRKSDIRPLAQLFLDRFNQMNGTSVVFAPD
AFETICKCSFPGNVRELENCVNRAAALSDGVVVLGQELACQQGTCLSSELSRLQEGAASP
IGGLGVGRVVTPTVRRTPPPPPAPPVASSPDDTLGYPRRKTANTAREDLIAAMEEAGWVQ
AKAARLLGMTPRQVAYALQKHGIEVRKI
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctggccgtggcgcggccgagcggcacgcgctcgatgcggtcttcgagatcgcc
aagtcttttgcaacggcgcccgatccgatcgacgtggtgccggacattttaaatgttctt
tcatctttcctcgatctgcgacacggggttctggccttgctggcagagcccggcagcgcg
ccgccccccggcacggtgaacccctatcatatcgccgccaccgctttcgtgcatgacgag
agcatgccgatcgcagaggtgatcccggacaaggtggtgcagatggtgttccgctcgggg
gtgacgctggtctctttcgatctggccgatgaatacgggccggacgcggtgcccacgcgg
ctgcgggactgcgggcagaccttggtggccgtgccgctgcgcgaccccgagcgcagccag
ttcgtgctgggggtgctttgtgccttccgcagccatgacagcgatctcaccggcgcctcg
gatctggatgtgcgggtgatgacgatggtggccgcgctgctcgaacaggcgctgcgcttc
cgccgccgcatcgcccgcgaccgcgagcgcgcgctgaccgacacgcggcgcatgctgcaa
agcgtcaccgacggccggacccggcagcgcccgccggtcaacatcgacggcatcgtcggc
gacagcccggccattgccgatgtgatcgcgcaggtgaaacgggtggccggaacccgtgcc
ccggtgctgctgcgcggcgaaagcggcaccggcaaagagctgttcgcccgcgccgtgcac
accgcctcggaccgggcgcgcgggccgttcgtgcgggtgaactgcgccgcgctgtcggaa
acgctgttggagtcggagcttttcggccatgagaagggcgcgtttaccagcgccggggcg
ctgaagaaaggacggttcgaactggccgacaagggcacgctgttccttgacgagatcggc
gagatctcgcccgcgtttcagaccaagcttctgcgggttttgcaggagggcgagttcgaa
cgggtcggcggcaccaagacgatcaaggtcgacacgcgcatcgtcgccgccaccaacaag
gatctcgagcgcagcgtcgccgagggcagtttccgcgccgatctttatttccgtatctgc
gtcgtgcccatcgtgctgccgcccctgcgcgaccgcaagagcgacatccgcccgctggcg
cagctgttcctcgatcggttcaaccagatgaacggcaccagcgtggtgttcgcgcccgat
gccttcgagacgatctgcaaatgcagcttccccggcaacgtgcgcgagctggaaaactgc
gtgaaccgcgctgcggcgctgtcggatggcgtggtggtgctcgggcaggaactggcctgt
cagcagggcacctgtctgtcgtcggaattgtcgcggctacaggaaggcgcggcctcgccg
attggcgggcttggtgtggggcgggtggtgacacccaccgtgcggcgcacaccgccgccg
ccgcccgcaccgcccgtggccagcagccccgacgacaccttggggtatccgcgccgcaag
accgccaataccgcccgcgaagatctgatcgcggcgatggaagaggcgggctgggtgcag
gccaaggccgcgcggctgttgggtatgacaccgcggcaggtggcttacgcgctgcagaaa
cacggcatcgaggtgcgcaagatctga
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