Salipiger sp. CCB-MM3: AYJ57_00970
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Entry
AYJ57_00970 CDS
T04443
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
yan
Salipiger sp. CCB-MM3
Pathway
yan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AYJ57_00970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yan03400
]
AYJ57_00970
Enzymes [BR:
yan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AYJ57_00970
DNA repair and recombination proteins [BR:
yan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AYJ57_00970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ANT59055
UniProt:
A0A1B1PKE7
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All DBs
Position
1:203345..204787
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AA seq
480 aa
AA seq
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MRSVSLPEIGTFEAWRDEARALLTASVPPEEVLWQRGQGAADLFSDAPGTEAPPPAAAAP
LSVPRGFVDLARLAICHSDPERFARLYALLWALRSDKRLLSDRADPGIDRLERMAKEVRR
DRHKMTAFVRFREIGAPGANRRSFAAWFEPTHHIVELTAPFFVSRFGDMDWCILTPDISA
HFEGGDLRFAAGAVRPDLPEDATEDLWRTYFRNIFNPARLKPKAMQAEMPKKYWHNMPET
QLIPELLASAQARAQEMAEAAPTLAPARAGKITERLRAEPNAAPELPGDLAQALQGCRRC
PLWQDATQPVPGEGPKDAALMVVGEQPGDREDLEGRPFVGPAGQLFDKVATRAGLDRAEA
YLTNAVKHFKFTPRGKRRIHQAPNRGEVMHCRWWLDIERAQVKPKLILAMGATAAESLTG
SRAGLMARRGRVEHTEDGTPVLITLHPSYLLRLPEAERPAAEALFEEELRLAAKMVAALR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcgtcagcctgccagagatcggcaccttcgaggcgtggcgcgacgaggcgcgg
gcgctgcttaccgcatcggtgccgcccgaagaggtgctgtggcagcgcgggcagggtgcg
gctgacctcttttccgatgcccccggcaccgaagctccgccaccagccgccgccgcgccg
ctctcggtgccgcgcggctttgtcgatcttgcgcggctggcaatctgccacagcgatccc
gagcggttcgcccggctctatgcgctgctttgggcgctgcgctcggacaagcgcctgctg
agcgaccgcgccgatccgggcatcgaccggctcgaacggatggccaaagaagtccgccgc
gaccggcacaagatgaccgccttcgtccggttccgcgagatcggcgcccccggcgccaac
cgccgcagctttgccgcgtggttcgagccgacgcaccatattgtcgagttgaccgcgccc
ttcttcgtcagccgtttcggcgacatggactggtgtattctcacgcccgatatctcggca
catttcgagggcggcgatctgcgcttcgcagccggggccgtgcgtcccgatctgcccgag
gatgccaccgaggatctctggcgcacctatttccgcaatatcttcaatcccgcccggctg
aagcccaaggcgatgcaggcggagatgccaaagaaatactggcacaatatgcccgaaacc
cagctgatccccgaacttctggccagcgctcaggcgcgggcgcaggagatggccgaggcc
gctccaacgctggccccggcgcgcgccgggaagatcaccgaaaggctgcgcgcagagcca
aacgcagcgcccgaactgcccggcgatctggcgcaggcgctacagggctgccgccgctgc
ccgctgtggcaggacgccacgcagccggtaccgggcgaggggccgaaggatgcggcgctg
atggtggtgggcgaacagcccggagatcgcgaagacctcgaaggccgacccttcgtcggc
ccagcagggcagcttttcgacaaggtggcgacgcgggccgggctcgaccgagcggaggcc
tatctcaccaacgcggtgaagcatttcaaattcaccccgcgtggtaagcgccggatccat
caggcgccgaaccggggcgaggtgatgcactgccgctggtggctcgacatcgagcgcgcg
caggtgaagccgaagctgatcctcgccatgggcgccacagccgccgagagcctcactgga
agtcgcgcggggctgatggcgcggcggggacgggtggagcacaccgaagacggcacgccg
gtgctgatcaccctgcacccatcctacctgctgcgtctgcccgaggcggaaagaccggca
gccgaggccctgttcgaagaggaactgcgtctggcggcgaaaatggtcgccgcgttgcgc
tga
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