Salipiger sp. CCB-MM3: AYJ57_05870
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Entry
AYJ57_05870 CDS
T04443
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
yan
Salipiger sp. CCB-MM3
Pathway
yan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AYJ57_05870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yan03400
]
AYJ57_05870
Enzymes [BR:
yan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYJ57_05870
DNA repair and recombination proteins [BR:
yan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AYJ57_05870
RecFOR pathway proteins
AYJ57_05870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_16
AAA_3
AAA_14
RNA_helicase
AAA_2
AAA_33
TsaE
Rad17
nSTAND3
AAA_17
NB-ARC
AAA_18
AAA_28
ABC_tran
NACHT
NPHP3_N
AAA_11
AAA_24
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ANT59938
UniProt:
A0A1B1PMX6
LinkDB
All DBs
Position
1:complement(1207968..1209002)
Genome browser
AA seq
344 aa
AA seq
DB search
MVDSDPTLRPEPLPEDEGRALRPQMLGDFIGQAEARANLRVFIQSARARGESMDHTLFHG
PPGLGKTTLAQIMARELGVGFRMTSGPVLAKAGDLAAILTNLEARDVLFIDEIHRLNPAV
EEVLYPAMEDYELDLVIGEGPAARTVRIELQPFTLVGATTRLGLLTTPLRDRFGIPTRLQ
FYTEDELNEIVSRNAVKLGVRAEPEGAREIARRARGTPRIAGRLLRRVVDFAVVEGDGVV
TRELADGALTRLGVDQLGLDGADRRYLTLMAENYSGGPVGIETLSAALSESRDALEEVIE
PYLLQQGLIQRTPRGRMLAQRAWDHLGLPVPRPQVPGQGTLFDG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacagcgatcccaccctgcgccccgagccgctgcccgaggacgagggccgcgcg
ctgcgcccgcagatgctgggcgatttcatcggtcaggccgaggcgcgggccaacctgcgg
gtgttcatccagtcggcgcgggcgcgcggtgagtcgatggaccacacgctgtttcacggg
ccgccgggccttggcaagacgacgctggcgcagatcatggcgcgcgagcttggggtgggc
tttcgcatgacctccggcccggtgctggccaaggccggtgatctggcggcgatcctcacc
aatctcgaggcgcgcgacgtgctcttcatcgacgagatccaccgcctcaacccggcggtg
gaagaggtgctctacccggcgatggaggattatgagctcgacctggtgatcggcgagggg
cccgcggcgcgcacggtgcggatcgagttgcagcccttcacgctggttggggcgaccacg
cggcttggtctgctgaccacgccgctgcgcgaccgtttcggcatcccgacgcggctgcag
ttctacaccgaggacgaactgaacgagatcgtcagccgcaacgcggtcaagctgggtgtg
cgggccgagccggaaggcgcgcgcgagatcgcccgccgcgcccgcggcacgccgcggatc
gccgggcggctgctgcgccgggtggtggatttcgccgtggtcgagggcgatggcgtcgtg
acccgcgaactggcggacggggcgttgacgcggcttggggtggatcagctgggccttgat
ggcgccgaccggcggtatctgacgctgatggcggagaattactccggcgggccggtgggc
atcgagacgctttcggcggcgctgtcggaaagccgcgacgcgctggaagaggtgatcgag
ccttatctgctgcagcaggggctgatccagcgcaccccgcgcgggcggatgctggcgcag
cgggcgtgggatcacctcgggctgccggtgccgcggccacaggttccggggcagggcacg
ctcttcgacggctga
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