KEGG   Salipiger sp. CCB-MM3: AYJ57_05985
Entry
AYJ57_05985       CDS       T04443                                 
Name
(GenBank) tRNA pseudouridine(55) synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
yan  Salipiger sp. CCB-MM3
Brite
KEGG Orthology (KO) [BR:yan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:yan03016]
    AYJ57_05985
Enzymes [BR:yan01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     AYJ57_05985
Transfer RNA biogenesis [BR:yan03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AYJ57_05985
 Prokaryotic type
    AYJ57_05985
SSDB
Motif
Pfam: TruB_N TruB_C_2 DUF4945
Other DBs
NCBI-ProteinID: ANT59959
LinkDB
Position
1:complement(1227615..1228520)
AA seq 301 aa
MARKKGRDISGWLIVDKPAGMTSTSVVNKVRWALAAKKAGHAGTLDPEATGVLAVALGEA
TKTVPYITDAMKAYRFTVRLGQATNTDDAEGEILRESAERPSDEEIKEALHQFVGDIQQV
PPQFSAVKVDGERAYKRARDGEEMELSARPLWVESLIMLSRPDADHVELEMVCGKGGYVR
SIARDLGEALGCFGHVLWLRREWSGPFEAKDGISVEEIDALAKTPELDAKLLPTEVGLAD
LPELRCTPEGAAKLRNGNPGMVIPGEAEYGDEAWASFEGKPVAVGIFKAGELHPSRVFNL
T
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcacgcaaaaagggtcgggacatttccggttggctgatcgtcgacaaaccggccggc
atgacgtccacctcggtggtcaacaaagtgcgctgggcgctggcggcgaagaaggccggg
cacgcgggcacgctcgatcccgaagcgaccggcgttctggccgtggcgctgggtgaggcg
acgaaaaccgtgccctatatcaccgacgcgatgaaggcctaccgcttcaccgtgcggctg
gggcaggcgaccaacaccgatgacgccgagggcgagatcctgcgcgagagcgccgagcgt
ccctcggatgaggaaatcaaagaagcgctgcaccagttcgtcggcgacatccagcaggtg
ccgccgcagttctcggcggtgaaggtggatggtgagcgcgcctataagcgtgcccgcgac
ggcgaggagatggagctttccgcgcgtccgctctgggtggagtcgctgatcatgctgtcg
cgccccgatgcggatcacgtcgagctggagatggtctgcggcaagggcggctacgtgcgc
tcgatcgcccgcgatctgggcgaagcgctgggatgcttcggccatgtgctgtggctgcgc
cgcgagtggtcgggcccgttcgaggccaaggacggcatctcggtcgaggagatcgacgcg
ctggccaagacgccggaactggatgccaagctgctgccgaccgaggtggggctggccgat
ctgcccgagctgcgctgcacgcccgagggcgccgcaaagctgcgcaacggcaaccccggc
atggtgatccccggtgaggccgaatacggcgacgaggcctgggcctctttcgagggcaag
cctgtcgctgtcggcatcttcaaggcgggcgagttgcatccgagccgggtgttcaacctg
acctga

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