Salipiger sp. CCB-MM3: AYJ57_08520
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Entry
AYJ57_08520 CDS
T04443
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
yan
Salipiger sp. CCB-MM3
Pathway
yan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AYJ57_08520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yan03400
]
AYJ57_08520
DNA repair and recombination proteins [BR:
yan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AYJ57_08520
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AYJ57_08520
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ANT60397
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All DBs
Position
1:complement(1763551..1764282)
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AA seq
243 aa
AA seq
DB search
MEWRDTGILLTSRRHGESSAILEVFTPNHGRHLGVLRGGASRRIAPSLQPGAQLDLTWKA
RLEDHMGAFTAEPQRSRAANALSDRLSLAGLNAVCALLSFSLPEREAHPKLYARTEQLLD
LLPERDLWPLAYLRWEMALLDEMGFGLDLSACAVRGTNEELCFVSPRTGRAVSRQAAGKW
ADRLLPLPDILKGEGPGGDGEVLEALRTTGFFLESHMAPTLRDRPLPQARAAYVERFRRS
TDA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggaatggcgcgacaccggcatccttctgacctcgcgcaggcacggcgaaagctcggcc
atcctcgaggtcttcacgccaaatcacgggcggcacttgggtgtgctgcgcggtggagcc
tcgcgccggatcgcgcccagcctgcagcccggcgcccagcttgacctgacgtggaaggcc
cggctcgaggatcacatgggcgccttcaccgccgagccgcagcgctcgcgcgccgccaat
gcgctgtcggaccgcctgtcgctggccgggctcaacgcggtctgcgcgctgctcagcttc
tcgctgcccgagcgcgaggcgcaccccaagctctatgcccgcaccgagcagcttctggat
ctgctgcccgagcgcgatctctggccgctagcctatctgcgttgggaaatggcgttactc
gacgagatgggttttggccttgatctgtcggcctgcgcggtgcgcggcaccaatgaagag
ctgtgtttcgtctcgccccgcaccggccgcgcagtctcacgtcaggctgcgggcaaatgg
gccgaccggctgctgcccctgcccgacattctcaaaggcgaaggccccggcggcgacggc
gaggtcctcgaagcgctgcgcaccacgggcttctttctcgaaagccatatggcccccaca
ttgcgcgaccgtccgctgccgcaggcccgcgccgcctatgtcgagcgatttcgccgcagc
accgacgcgtga
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