Salipiger sp. CCB-MM3: AYJ57_09490
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Entry
AYJ57_09490 CDS
T04443
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
yan
Salipiger sp. CCB-MM3
Pathway
yan03030
DNA replication
yan03410
Base excision repair
yan03420
Nucleotide excision repair
yan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYJ57_09490
03410 Base excision repair
AYJ57_09490
03420 Nucleotide excision repair
AYJ57_09490
03440 Homologous recombination
AYJ57_09490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yan03032
]
AYJ57_09490
03400 DNA repair and recombination proteins [BR:
yan03400
]
AYJ57_09490
Enzymes [BR:
yan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYJ57_09490
DNA replication proteins [BR:
yan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AYJ57_09490
DNA repair and recombination proteins [BR:
yan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AYJ57_09490
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYJ57_09490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
AAA_16
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ANT60575
LinkDB
All DBs
Position
1:1947137..1949950
Genome browser
AA seq
937 aa
AA seq
DB search
MTQFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLQKYVEDSSGPDA
PTHVAVIFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRDATIAFNIACKELEGYEA
DDIIATLSCQARDAGGRVTIISSDKDLMQLVGDGVEMLDAMKNRRIDRDGVVEKFGVGPE
RVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGSLEELLDRAEEIKQPKRRQTLVENR
AQIELSKKLVQLDCETPLDFTLDDLEVQDPDPEKLLTFLAEMEFSTLTKRIANTLGAEAP
VITEAKAPAADTPAAGDAPEMPPIDPAAYTWVKSAADLAPWIAQARQCGWVAVDTETTGL
NEMTCDLVGVSLAIEPGQACYIPLAHRAAGGESDLFGSDDLAEGQMPMNEALDLLKPLLE
DPAVMKIGQNMKYDAKVLSRYGIGVAPIDDTMLISYALHAGLHGHGMDTLSERYLGHTPI
PIKDLLGSGKKMITFDRVPIEDAVKYAAEDADITLRLWKLLKPRLHLSRVTRVYEGTERP
LVPVLAQMELAGVQVDRGTLSRMSTAFAQKMAGLEAELHELAGHPFNVNSPAQVGEILFA
EMGLEGGKKTKTGAWSTPAEVLEDLATEHDFAARVLDYRQMQKLKSTYTDALQEHINAET
GRVHTSYSIAGANTGRLASTEPNLQNIPVRSEEGRRIREAFVAPEGKVIVALDYSQIELR
ILAHMADIAALKQAFREGQDIHAMTASEMFGVPMEEMTPEIRRRAKAINFGVIYGISGFG
LARNLRIPRGEAQAFIDRYFERFPGIKTYMDETIAFAKEHDRVETLFGRVIHTPEINAKG
PRSGFARRAAINAPIQGTAADIIRRAMIRMPAAIEGQPAKMLLQVHDELIFEVEEGGVDT
LIATAREVMEGAAEPVVKLDVPLVVDAGQGANWAEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcggcaagggctgccatctgcatctgatcgacggttcggccttcatcttc
cgggcctaccacgcgctgccgccgctcacccgcaagtccgacgggctgcccatcggcgcg
gtcagcggcttttgcaacatgctgcagaaatacgtcgaggacagctccggtcccgatgcg
ccgacccatgtggcggtgatcttcgacaagggcagccacaccttccgcaacgatctttat
gatcagtacaaggccaaccgcgaggcgatgcccgaggatctgcgcccgcagatcccgctc
acccgcgacgccaccatcgccttcaacatcgcctgcaaggagcttgagggctatgaggcc
gacgacatcatcgccacgctctcatgtcaggcgcgcgatgcgggcgggcgcgtgaccatc
atctcctcggacaaggatctgatgcagttggtcggtgacggcgtcgagatgctggacgcg
atgaagaaccgccgcatcgaccgtgacggggtggtcgagaaattcggcgtcggccccgag
cgcgtggtcgacgtgcaggcgctggccggggattcggtcgacaacgtgccgggcgcgccg
ggcatcggcatcaagaccgcggcgctgctgatcaacgaatatggctcgctcgaagagctt
ctggaccgcgccgaggagatcaagcagcccaagcgccgccagacgctggtcgagaaccgc
gcacagatcgaactgtccaaaaagctggtgcagctcgattgcgagacgccgctggatttc
accctcgacgatctcgaggtgcaggatcccgatcccgagaaattgctgaccttcctcgcc
gagatggaattcagcacgctgaccaagcgcatcgccaacaccctcggggccgaggcgccg
gtgatcaccgaggccaaggcgcccgccgccgacacgcccgccgccggtgacgcgcccgag
atgccgcccatcgatcctgccgcctacacatgggtgaaaagcgccgcggatcttgcgccg
tggatcgcgcaggcccggcagtgcggctgggtcgcggtggacaccgagaccaccggcctc
aacgagatgacttgcgatctggtcggcgtctcgctggccatcgagccggggcaggcctgc
tacattccgctggcgcatcgcgcggcaggtggcgagagcgaccttttcggctcggacgat
ctggcagaggggcagatgccgatgaacgaggcgctggacctgctgaaaccgctgctcgaa
gacccggcggtgatgaagatcggccagaacatgaaatacgatgccaaggtgctgtcgcgc
tacggcatcggcgtcgcgccgatcgacgacaccatgctgatctcttacgcgctgcacgcc
ggtctgcacggccacggtatggacacgctgtcggaacgctacctcggccacacgccgatc
ccgatcaaggacctcttgggctcgggcaagaagatgatcaccttcgaccgggtgccgatc
gaggatgcggtgaaatacgccgccgaggacgccgacatcactctgcgcctgtggaagctg
ctgaagccgcggctgcacctctcccgcgtcacccgtgtttatgaaggcactgagcgcccg
ctggtgccggtgctggcgcagatggagctggccggtgtgcaggtggaccgcggcacgctc
tcgcgcatgtccaccgccttcgcgcagaagatggccgggctcgaggccgagctgcacgaa
ctggcggggcacccgttcaacgtcaactccccggcgcaggtgggcgagatcctctttgcc
gagatggggctcgagggcggcaagaagaccaagaccggcgcatggtcgacgcctgccgag
gtgctggaggatctggccaccgagcatgacttcgccgcccgcgtgctggactaccgccag
atgcagaagctgaagtcgacctacaccgacgcgctgcaggagcatatcaacgccgagacg
ggccgggtgcacacctcctattccatcgccggggcgaacaccgggcgtctcgcctcgacc
gagccgaacctgcagaacatcccggtgcgctcggaagaggggcggcgtatccgcgaggct
ttcgtcgcgcccgagggcaaggtgatcgtggcgctcgactacagccagatcgagctgcgc
atccttgcgcatatggccgatatcgccgcgctcaagcaggccttccgcgaggggcaggac
attcacgcgatgaccgcgtccgagatgttcggcgtgccgatggaagagatgacgccggag
atccgccgccgcgccaaggcgatcaacttcggggtgatctacggcatttcgggctttggc
cttgcgcgcaacctgcgcatcccgcgcggcgaggcgcaggccttcatcgaccgctatttc
gagcgcttcccgggcatcaagacctacatggacgaaaccattgccttcgccaaggaacac
gaccgggtcgagacgctgttcggacgggtgatccacacgcccgagatcaacgccaagggc
ccgcgctcgggctttgcgcggcgcgccgcgatcaacgcgccgatccagggcacggcggcg
gacatcatccgccgcgcgatgatccgcatgcccgccgcgattgagggccagcccgccaag
atgctgctgcaggtgcacgacgaactgatcttcgaggtcgaggaaggcggcgtcgacacg
ctcatcgccaccgcgcgcgaggtcatggagggcgccgccgagccggtggtgaagctcgac
gtgccgctggtggtcgacgccgggcagggggcgaactgggccgaggcgcattaa
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