Salipiger sp. CCB-MM3: AYJ57_10290
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Entry
AYJ57_10290 CDS
T04443
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
yan
Salipiger sp. CCB-MM3
Pathway
yan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AYJ57_10290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yan03400
]
AYJ57_10290
Enzymes [BR:
yan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYJ57_10290
DNA repair and recombination proteins [BR:
yan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AYJ57_10290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
Zn_ribbon_PriA
ResIII
Helicase_C
MarR_2
AAA_30
AAA_16
nSTAND_NTPase5
AAA_5
AAA_22
HTH_20
BRK
Motif
Other DBs
NCBI-ProteinID:
ANT60720
LinkDB
All DBs
Position
1:2119549..2121738
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AA seq
729 aa
AA seq
DB search
MDDYFDEGTLISVLTTQPLDRLLDYKAPAGGCAQGAFVEVPLGPRKVFGVVWGPGQGGFD
PAKVRGASRVLEAAPMRAELREFLERSADYTLTPRTAMLRLATRAPGLGEAPSMRKIYRR
GDSVPERLTDARRRVLEVLDEMGGLSLTLKELADAAGVTSSVVKGLAKLGAVREEEAPRD
TAFARLDPNYGGKALTEDQAKAAEELRAGVRSGKYGTVLLKGVTGSGKTEVYLEAVAEAL
RKGRQALVLLPEIALTSEFLTRVEARFGARPAEWHSGVTVTERRRVWRQVAEGGAQLVVG
ARSALFLPFRDLGLTVVDEEHDTSYKQEEGVLYNARDMAVLRASICAGRVVLASATPSLE
SWANADAGKYQRLDLVSRFGPAVMPEMRALDMRGEDLPGSRWISPSLQAAVKRRIAQGEQ
SLLFLNRRGYAPVTICRACGHQIACPHCDARMVEHRFQQRLICHQCGESTPKPEKCPSCE
VEGKLAAVGPGVERLAEEAAEVFPDARLAVLSSDLFGSARQLKAEIEKIAMGGADIVIGT
QLVAKGHNFPNLTLVGVIDADLGLQGSDLRAAERTFQLMRQVAGRAGRAEKPGTALLQTF
QPEHPVIRAILSGDEEGFWKAEADERRAAGMPPYGRLAGVILSSTEVQDVFDLGNAMARQ
DGPLRRIGAQIYGPAPAPIARVRGRHRVRLLVKAPKGVALQAALAEWAGQFRLKGELRMA
IDIDPQSFF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggatgattactttgacgaaggcacgctgatctcggtgctgaccacgcaaccgctggat
cggctgctggactataaggcgcccgcgggtggctgtgcgcagggggcgtttgtcgaggtg
ccgctggggccgcgcaaggtgttcggcgtggtctgggggccggggcagggcggcttcgat
cccgccaaggtgcgcggcgcgtcgcgggtgctcgaagcggcgccgatgcgcgcggaactg
cgggaattccttgagcgatccgcggattacacgttgacgccgcgcaccgcgatgctgcgg
cttgccacccgcgcgccggggctgggcgaggcgccctcgatgcgcaagatctaccgccgc
ggtgacagcgtgcccgagcggctcaccgatgcgcggcgccgggtgctggaggtgctcgac
gagatgggcggcctgtcgctgacgctgaaggaactggccgatgccgccggggtgacctct
tcggtggtcaaggggctggcaaagctcggggccgtgcgtgaggaggaggcgccgcgcgat
accgcctttgcccggctcgatccgaactatggcggcaaggcgttgaccgaggatcaggcc
aaggccgccgaggagctgcgcgccggggtgcgctcgggcaagtacggtacggtgctgctg
aagggggtgaccggctcgggcaagaccgaggtctacctcgaggcggttgccgaagcgctg
cgcaagggccggcaggcgctggtgctgctgcccgagatcgcgctgacctcggaattcctg
acccgggtcgaggcgcgcttcggggcgcggcccgccgagtggcactctggggtcacggtg
accgagcgtcggcgggtctggcggcaggtggccgagggcggcgcgcagctggtggtgggg
gcgcgttcggcgctgttcctgccgttccgcgatcttggcctgacggtcgtcgatgaggag
cacgacacctcctacaagcaggaggagggtgtgctctacaacgcccgcgacatggcggtg
ctgcgcgcttcgatctgcgcggggcgggtggtgctggcctcggcgacgccctcgctcgag
agctgggccaatgccgacgcaggcaagtaccagcggctcgatctggtctcgcgcttcggc
ccggcggtgatgccggagatgcgcgcgctcgacatgcgcggcgaggacctgccgggcagc
cgctggatctcgccctcgttgcaggcggcggtgaagcggcggatcgcgcagggcgagcag
tctttgctgttcctcaaccggcgcggctacgcgccggtcaccatctgccgcgcctgcggt
caccagatcgcctgcccgcattgcgacgcgcgcatggtcgagcaccgcttccagcagcgg
ctgatctgccaccagtgtggcgagagcacgccgaagccggaaaagtgcccttcctgcgag
gtcgagggcaagctggcggcggtcgggccgggggtcgagcggctggccgaggaggcggcg
gaggtctttcccgacgcgcggttggcggtgctctcgtcggacctcttcggctcggcgcgg
cagctgaaggcggagatcgagaagatcgccatgggcggggccgacatcgtcatcggcacg
cagctggtggccaaggggcacaactttccgaacctgaccctcgtgggggtgatcgacgcc
gatctggggctgcagggttcggacctgcgcgccgccgagcgcacctttcagctgatgcgg
caggtggccgggcgcgcgggccgggccgagaagccgggcacggcgcttttgcagaccttc
cagcccgagcacccggtgatccgggcgatcctttcgggcgacgaagagggcttttggaag
gccgaagccgatgagcgccgcgccgccgggatgccgccctatggccgcctcgcgggggtg
atcctgtcgtcgaccgaggtgcaggacgtgttcgatctgggcaacgccatggcgcggcag
gacggcccgctgcggcggatcggtgcgcagatttacgggcctgcgcctgcgcccatcgcg
cgggtgcgcgggcggcaccgggtgcggctgctggtgaaggctccgaagggagtggcgttg
caggcggcgctggcggaatgggccgggcagttccggctcaagggcgagctgcgcatggcg
atcgacatcgacccgcagagctttttctga
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