Salipiger sp. CCB-MM3: AYJ57_10395
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Entry
AYJ57_10395 CDS
T04443
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yan
Salipiger sp. CCB-MM3
Pathway
yan03420
Nucleotide excision repair
yan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYJ57_10395
03430 Mismatch repair
AYJ57_10395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yan03400
]
AYJ57_10395
Enzymes [BR:
yan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYJ57_10395
DNA repair and recombination proteins [BR:
yan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYJ57_10395
MMR (mismatch excision repair)
Other MMR factors
AYJ57_10395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ANT60736
UniProt:
A0A1B1PQ78
LinkDB
All DBs
Position
1:complement(2137189..2139636)
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AA seq
815 aa
AA seq
DB search
MSSFDDMDAFEGASLSQRAMAARPAPYLDDLNPAQREAVERLDGPVLMLAGAGTGKTKAL
TARIAHLLTTGRARPNEILSVTFTNKAAREMKERVGRLLGHAVEGMPWMGTFHSICVKLL
RRHAELVGLKTNFTILDTDDQIRLLKQVIAANNIDEKRWPARQLSGVIDNWKNRAWTPDK
VPASEAGAFNNRGTELYAQYQTRLRELNACDFGDLLLHVVTIFQQHADVLEQYQRWFRFI
LVDEYQDTNVAQYLWLRLLAQGHTNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAHVV
RLEQNYRSTAHILAAASSVIRGNENRLGKELWTEADGGEKVRLIGHWDGEEEARWIGEEI
EAAQRGSRGMRPVSLDDMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAM
AYFRLVVSPEDDLAFERIVNTPKRGLGDKAQQKIQIKARANGTTLLNGARLLLRDKEITG
KGAGKLATFVEQIDRWHEVARQQLGLPSEVQQDDDDLVLIDEDKPLAKTMSHVELAEVML
DESGYTEMWQNDKNPDSPGRLENLKELVKALENFDNLQGFLEHVALIMDNETEEAGAKVS
IMTLHAAKGLEFPAVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEELCTIS
FAANRRVFGQWQSALPSRFIDELPEQHVEILTPPGLYGGGYGAAGMNSGFGGGSGLESRA
AEANVYNSPGWKRLQERSSSARSVSQPRESRNQVIDLQAVSAFETGERVFHQKFGYGAIV
AIEGDKLEIDFEKAGVKKVVARFVTAADSAGDVPF
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctttgacgacatggatgcattcgagggggcctcgctgtcgcagcgggccatg
gcggcgcgccccgcgccctatctcgacgacctcaaccccgcgcagcgcgaggcggtggaa
cggctcgacgggccggtgctgatgctggccggcgccggcacaggcaagaccaaggcgctg
accgcccgtatcgcgcatctgctgaccaccggccgcgcgaggccgaacgagattctctcg
gtgaccttcaccaacaaggccgcgcgcgagatgaaagagcgtgtgggccgcctgctcggc
cacgcggtcgagggcatgccgtggatgggcaccttccactcgatctgcgtcaagctgctg
cgccgccacgccgaactggtggggctgaagacgaatttcaccatcctcgacaccgacgat
cagatccgtctgctgaaacaggtgatcgcggccaacaacatcgacgagaagcgctggccc
gcccggcagctctcgggggtgatcgacaactggaagaaccgcgcctggactcccgacaag
gtgccggcgtccgaggctggcgccttcaacaaccgcggcaccgagctttacgcccagtat
cagacccgcctacgcgagctgaacgcctgcgatttcggcgacctgctgctgcatgtggtg
acgatcttccagcagcacgccgatgtgctcgagcaataccagcgctggttccgcttcatc
ctcgtggacgagtatcaggataccaacgtcgcccaatacctctggctgcggctgctggcg
cagggccacaccaacatctgctgcgtcggcgacgacgatcagtcgatctatggctggcgc
ggcgccgaagtgggcaacatcctgcgcttcgaaaaggatttccccggcgcccatgtggtg
cggctggaacagaactaccgctcaaccgcgcatatcctcgccgccgcctcctcggtgatc
cgcggcaatgagaaccggctcggcaaggaactctggaccgaggccgatggcggcgagaag
gtccgcctcatcggccattgggacggcgaggaagaggcgcgctggatcggcgaggagatc
gaggcggcgcagcgcggatcgcgtggaatgcggcccgtctcgcttgatgacatggcgatc
ctcgtgcgcgcctcgcaccagatgcgcgccttcgaggatcgtttcctgaccatcggcctg
ccctaccgggtgatcggcggcccgcgcttctacgagcggctcgagattcgcgatgccatg
gcctatttccggctggtggtctcgcccgaagatgatctggccttcgagcgcatcgtcaac
acgcccaagcggggcctcggcgacaaggcgcagcagaagatccagatcaaggcgcgcgcg
aacggcacgacgctgctcaacggcgcgcggctgctgctgcgcgacaaggagatcaccggc
aagggcgcgggcaagctggccaccttcgtcgagcagatcgaccgctggcacgaggtggcc
cgccagcaactgggcctcccctcggaggtgcagcaggatgatgatgatctggtgctgatc
gacgaggacaagccgctggccaagaccatgagccatgtggaactggccgaggtcatgctc
gacgagagcggctacaccgagatgtggcaaaacgacaagaaccccgattccccgggccgg
ctggaaaacctcaaggaactggtcaaagcgctggagaatttcgacaacctgcaggggttc
ctcgaacacgtcgcgctgatcatggacaatgagacggaagaggccggcgccaaggtctcg
atcatgacgctgcacgcggccaagggtctcgaatttcccgcggtgttcctgccgggctgg
gaggacgggctcttcccctcccagcgctcgatggacgaaagcggcctcaaggggctcgag
gaagagcgccgcctcgcctatgtcgggatcacccgcgccgaggagctctgcaccatctcc
ttcgccgccaaccggcgcgtgttcggccagtggcaatcggccctgccctcgcgcttcatc
gatgagttgcccgagcagcacgtcgagattctcaccccgcccggcctctacggcggcggc
tatggcgccgcgggcatgaacagcggctttggcggcggatcggggctggaaagccgcgcc
gccgaggccaatgtctacaattccccgggctggaaacgcctgcaggaacgctcctccagc
gcccgctcggtcagccagcctcgcgagagccgcaatcaggtgatcgacctgcaggcggtc
tcggccttcgagaccggtgagcgcgtcttccaccagaaattcggctatggcgccatcgtc
gccatcgaaggcgacaagctcgagatcgacttcgagaaggcaggcgtcaagaaagtggtg
gcccgtttcgtcaccgctgcagattcggcgggcgacgtgccgttctga
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