Salipiger sp. CCB-MM3: AYJ57_17285
Help
Entry
AYJ57_17285 CDS
T04443
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
yan
Salipiger sp. CCB-MM3
Pathway
yan03030
DNA replication
yan03430
Mismatch repair
yan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYJ57_17285
03430 Mismatch repair
AYJ57_17285
03440 Homologous recombination
AYJ57_17285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yan03032
]
AYJ57_17285
03400 DNA repair and recombination proteins [BR:
yan03400
]
AYJ57_17285
Enzymes [BR:
yan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYJ57_17285
DNA replication proteins [BR:
yan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYJ57_17285
DNA repair and recombination proteins [BR:
yan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYJ57_17285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
ANT62181
UniProt:
A0A1B1PUA8
LinkDB
All DBs
Position
2:complement(760091..763588)
Genome browser
AA seq
1165 aa
AA seq
DB search
MSDPRFIHLRVHTEYSLLEGAVRLKKLPGLCEAMEMPAVAVTDTNNLFSALEFSVTASGA
GVQPIIGCQVDLRYVEPVPGEKPKSPAPIVLLAQNERGYENLMKLNSCLYLRGDGQEAHV
TLEELETYGAGLICLSGGPDGPIGRHLRENHRAAAQTLLTRLHQIYDDRLYVELQRHPGE
NGLPPEERIAERGHVEMAYEMGLPLVATNDVYFPKAEMYEAHDALICISEGAYVDQQEPR
RRLTSQHYLKSPQEMATLFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEVEELRR
QANEGLQARLAVIPHAVSVEEYQKRLDFELGIIEGMGFPGYFLIVADFIKWSKDNDIPIG
PGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREETIRYVQ
EKYGRDKVGQIITFGALLSKAAVRDVGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALQD
EPRLREEARNEEVVDRLLTYGQQVEGLLRNASTHAAGVVIGDRPLDQLVPLYQDPRSDMP
ATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVNLILKSGRPIHVAADGAELYDPPEGAEN
QMNLIPLDDEKTYELYSAAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPME
NIPVYCEVKNGLREITSVHPSIDHILAETQGIIVYQEQVMQIAQEMAGYSLGGADLLRRA
MGKKIKEAMDAERPKFEKGAAENGVDKKKATEVFDLLEKFANYGFNKSHAAAYAVVSYQT
AWLKANHPVEFMAGVMNCDIHLTDKLAVYFDETKNGLKLPYVPPCINRSQASFDVVEGEL
VYALGALKNVGLDAMRLVVEGRGDTPFTTLFDVARRVDLKRVGKRPMEMMARAGVFDQLD
KNRRRVFDSLDALVAYSAAIHEQKASAQVSLFGEAGDDLPEPRLSPVPDWLPAERLSEEF
KAIGFYLSGHPLDDYMPALKRRDVMTLEEATNKARGGPCIAKLAGVVAGRQERKSAKGNR
FAFAQLSDPTGAYEVTLFSETLEKSREFLETGSKVVITVEATMESDQLKLLARSVGPVEQ
VVAGAGATGLKIWIEGAGAINQIASVLSRAAEQMPKAGRGPIRLCLADNGLPGEVEMDLQ
QDFPVTPEIKGAVKSLGGVLAVEDF
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatccccgattcatccacctccgcgtccataccgaatactccctgcttgaaggg
gccgtgcggctgaagaagctgccgggcctctgcgaggccatggaaatgcccgccgtggcg
gtgacggacaccaacaacctcttttcggcgctggagttttcggtgaccgccagcggcgct
ggcgtgcagccgatcatcggctgtcaggtcgatctgcgctatgtcgagccggttccgggt
gaaaagcccaagagccccgcccccatcgtgctgctggcgcagaacgagcgcggctacgag
aacctgatgaagctcaactcctgcctctacctgcgcggcgacgggcaggaggcgcatgtg
acgctggaggagctcgagacctatggcgcggggctgatctgcctttcgggtggccccgac
ggccccattggccgtcacctgcgcgagaaccaccgcgccgcggcgcagacgctgctgacc
cggctgcatcagatttacgacgaccggctttatgtggagttgcagcgccaccccggagag
aacggcctgccgccagaggaacgcatcgccgagcgcggccatgtggagatggcctatgag
atgggcctgccgctggtcgccaccaacgacgtctatttccccaaggccgagatgtatgag
gcgcatgacgcgctgatctgtatttccgagggggcctatgtcgaccagcaagagccgcgc
cgccgcctgacgtcgcagcactacctcaagagcccgcaggagatggcgacgcttttcgcc
gacctgcccgaggccatcgagaacaccgtcgagatcgccaagcgctgcgccttcatggcc
tatcgccgcgatccgatcttgccgaagttcgccgacgacgaggtcgaggaactgcggcgg
caggccaatgagggcctgcaggcgcgtctggcggtgatcccgcatgcggtctcggtcgag
gaataccagaagcggctcgacttcgagcttggcatcatcgagggcatgggctttcccggc
tacttcctgatcgttgccgacttcatcaaatggtccaaggacaacgacattcccatcggt
ccgggccgcggctcgggcgcgggctcgctggttgcctatgcgctgaccatcaccgacctc
gacccgctgcgctactcgctgctgttcgagcgcttcctcaaccccgaacgtgtgtcgatg
cccgacttcgacatcgacttctgcatggaccggcgcgaggaaacgatccgctacgtgcag
gagaaatacgggcgcgacaaagtggggcagatcatcaccttcggcgcgctgctgtccaag
gccgccgtgcgcgacgtgggccgggtgctgcagatgccctatgggcaggtcgaccggctg
tcgaagatgatccccgtagagggcgtcaaacccgtctctatcgagaaggcgctgcaggat
gagccgcggctgcgtgaagaggcccgcaacgaagaggtcgtcgaccggctgctgacctat
ggccagcaggtcgaggggctgctgcggaacgcctcgacccacgccgcgggcgtggtgatc
ggcgaccggccgctggatcagctggtgccgctctatcaggatccgcgctcggacatgcct
gccacccagttcaacatgaaatgggtggaacaggcgggtctggtgaagttcgacttcctt
ggcctcaagacgctgacggtgatccaaaacgcggtgaacctgatcctgaagtcggggcgc
ccgatccatgtcgccgccgatggcgcagagctttacgatccgcccgagggcgcggaaaac
cagatgaacctcatcccgctggatgacgagaagacttacgagctctactcggcggccaag
acggtggcggtgttccaggtggaaagctcgggcatgatggatgccctcaagcgcatgaag
cccacctgtatcgaggacatcgtggcgctcgtggcgctctaccgccccggcccgatggag
aacatcccggtctattgcgaagtcaagaacgggctgcgcgagatcacctcggtgcaccct
tcgatcgaccacatccttgccgagacgcagggcatcatcgtctatcaggaacaggtgatg
cagatcgcgcaggagatggcgggctactcgctcggcggcgccgacctgctgcgccgcgcc
atgggcaagaagatcaaggaggcgatggacgccgagcgtccgaaattcgagaagggcgcg
gctgagaacggcgtcgacaagaagaaggccaccgaggtcttcgaccttctggagaaattc
gccaactacggtttcaacaaatcgcacgcggcggcctatgcggtggtgtcctaccagacc
gcttggctgaaggcgaaccacccggtggagttcatggcaggcgtcatgaactgcgatatc
cacctcaccgacaagctcgccgtctatttcgacgagacgaagaacgggctgaagctgccc
tatgtgccgccctgcatcaaccgctcgcaggcgagcttcgacgtggtcgagggcgagctg
gtctatgcgcttggcgcgctgaagaacgtcggccttgatgccatgcggctggtggtcgag
gggcgcggcgatacccccttcaccacgctctttgacgtggcgcggcgggtcgatctgaag
cgcgtcggcaagcgcccgatggagatgatggcgcgcgccggtgtcttcgatcagctcgac
aagaaccgccgccgggtgttcgacagtctcgatgcgctggtcgcctattctgccgcgatc
cacgagcagaaggcgtcggcgcaggtctcgctgttcggcgaggccggggatgacctgccg
gagccgcggctttcgccggtgcccgactggctgcccgcagagcggctgtcggaagagttc
aaggccatcggcttttacctctcgggccaccctcttgacgattacatgcccgcgctgaag
cggcgcgacgtgatgaccctcgaggaggcgaccaacaaggcgcgcggcggtccgtgcatc
gccaagctggcgggcgtcgtcgccgggcggcaggagcgcaaatcggccaagggcaaccgc
tttgcctttgcgcagttgtcggatcccacgggcgcctatgaggtgacgctgttctctgag
acgctggagaagagccgcgagtttctcgagaccggctcgaaggtggtgatcaccgtcgag
gccacgatggagagcgaccagctcaagctgctggcgcgctcggtggggccggtcgagcag
gtggttgcgggcgcaggggcgactgggctgaagatctggatcgagggcgcgggcgcaatc
aaccagatcgcttcggtgctgagccgcgccgccgaacagatgcccaaggccgggcgcggg
ccgatccggctctgccttgccgacaacgggctgcccggcgaggtcgagatggacctgcag
caggacttcccggtgacgcccgagatcaagggcgcggtgaaatcactgggcggggtgctg
gcggtcgaggacttctga
DBGET
integrated database retrieval system
