Salipiger sp. CCB-MM3: AYJ57_23360
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Entry
AYJ57_23360 CDS
T04443
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yan
Salipiger sp. CCB-MM3
Pathway
yan03420
Nucleotide excision repair
yan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYJ57_23360
03430 Mismatch repair
AYJ57_23360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yan03400
]
AYJ57_23360
Enzymes [BR:
yan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYJ57_23360
DNA repair and recombination proteins [BR:
yan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYJ57_23360
MMR (mismatch excision repair)
Other MMR factors
AYJ57_23360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH_5
HHH
AAA_11
AAA_12
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ANT63423
UniProt:
A0A1B1PXV8
LinkDB
All DBs
Position
unnamed3:74649..76709
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AA seq
686 aa
AA seq
DB search
MAQADTLQDPLAALNDAQRAAATFGIAPGDTRAGPPLLVIAGAGSGKTSTLAHRVAHLLM
NGADPQRILLMTFSRRAATELTRRVEAITTRAMGTGIVAEALTWAGTFHAIGARLLREHA
PAIGLNPEFSIHDREDSADLINLCRNALGFSQAEKRFPAKGTCLAIYSRAVNAGAPLEEV
LRDHFPWCAMWEDELKRLFGAYVRAKQEQNVLDYDDLLLAWAQVMSDAEFAAHIGSAWDH
VLIDEYQDTNRLQARILMALKPDGRGLTVVGDDAQSIYAFRAATVRNILDFPAAFTPPAD
VITLDRNYRSTVPILEAANAVIGEARERFTKNLWTTRASAEKPRLVTVNTEADQARYMVD
RILADREIGTTLKQQAVLFRTSSHSVQLEAELTRRNVPYVKFGGLKFLDSAHVKDLLSVL
RLARNPRDRVAGFRVLQLIPGIGPKSAANILDALDLAPDPAAALNDVAPPAKAEADWPGF
VTAMTTRAPWPAAIGLARAWYEPHLERIHEDADTRRNDLLQLEQIAAGYPSAEAFLTELT
LDPPDATSDRSGVPLKDEDYLILSTIHSAKGQEWKSVYLLNAVDGCIPSDLGTGTTQDLE
EERRLLYVAMTRAKDRLTLGLPLRFYVTQQRRGGDRHVYATRTRFITREMLEHFDSAHWS
PAPQPGAAAPAPGRIDVAAKMRDMWG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcagacactcttcaggaccctctcgcggcgctgaacgacgcgcagcgcgcc
gccgccaccttcggcatcgcccccggcgacacgcgcgccgggccgccgctgctggtgatc
gctggcgcgggttctggcaagaccagcacgctggcgcaccgcgtggcgcatctgctgatg
aacggcgccgatccgcagcgcatcctgctgatgaccttctcgcgccgcgccgccactgag
ctcacccgccgggtcgaggcgatcaccacccgcgccatgggcaccggcatcgtcgccgag
gcgctgacatgggcgggcaccttccatgccatcggcgcgcggctgctgcgcgaacatgcg
cctgccatcggcctgaaccccgagttctcgatccacgaccgcgaggacagcgccgacctg
atcaacctctgccgcaacgcccttggcttctcgcaggcagaaaagcgctttccggccaag
ggcacctgccttgcgatctattcgcgcgcggtcaatgcgggcgcgccgctggaggaggtg
ctgcgcgaccacttcccgtggtgcgccatgtgggaagacgagctgaaacgtctcttcggc
gcttatgtccgcgccaagcaagagcagaacgtgctcgactatgacgacctcttgctggcc
tgggcgcaggtgatgtcggacgccgagtttgccgcgcatatcggcagcgcgtgggaccat
gtgctgatcgacgagtatcaggacaccaaccgcctgcaggcgcgcatcctcatggcgctg
aaacccgatgggcgcgggctgaccgtggtgggcgacgatgcgcagtcgatctatgccttc
cgcgccgccacggtgcgcaacatcctcgactttcccgccgccttcacgccgcccgccgat
gtcatcacgctcgatcgaaactaccgctcgaccgtccccatcttggaggccgccaacgcc
gtgatcggtgaggcccgcgagcgctttaccaagaacctctggaccacccgcgcctctgcc
gagaaaccgcggctcgtcacggtgaacaccgaggccgatcaggcgcgctatatggtcgac
cgcatccttgcggaccgcgagatcggcaccacgttgaagcagcaggcggtgctcttccgc
acctccagccattcggtgcagctcgaggccgagttgacccgccgcaatgtgccttacgtc
aaattcggcgggctgaagttcctcgacagcgcccatgtgaaggacctgctgtcggtgctg
cgcctcgcgcgcaatccgcgtgaccgggtggcgggctttcgtgtgctgcaactgatcccc
ggcatcgggccaaagtcggcggcgaacattctggacgcgctcgatctcgcgcccgatccc
gccgccgcgctgaacgatgtcgccccgcccgccaaggccgaggccgactggcccggtttc
gtcaccgcgatgaccacccgcgcgccatggcccgccgccatcggccttgcccgggcgtgg
tacgagccgcatctggagcgcatccacgaggatgccgacacccgccgcaacgacctgctg
cagcttgagcagatcgccgcgggctacccatcggccgaagccttcctgaccgagctgacc
ctcgatccgccggacgccacctcggaccgttcgggcgtgccactcaaggacgaggattat
ctcatcctctcgaccatccattcggccaaggggcaggagtggaaatcggtctacctgctc
aacgcggtcgatggctgcatcccctcggacctcggcaccggcaccacgcaggacctcgag
gaagagcgccgcctgctctatgtcgcgatgacccgcgccaaggaccggctgacgctgggc
ctgccgctgcggttctacgtcacgcagcagcggcgcggcggtgaccggcatgtctatgcc
acgcgcacccgcttcatcacccgcgagatgctggagcatttcgacagcgcccattggtcg
cccgccccgcagccaggcgcggcggctccggcaccgggccggatcgacgtcgccgccaag
atgcgcgacatgtggggctga
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