Yersinia alsatica: N0H69_02330
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Entry
N0H69_02330 CDS
T08521
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
yas
Yersinia alsatica
Pathway
yas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N0H69_02330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yas03019
]
N0H69_02330
03009 Ribosome biogenesis [BR:
yas03009
]
N0H69_02330
Enzymes [BR:
yas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N0H69_02330
Messenger RNA biogenesis [BR:
yas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N0H69_02330
Ribosome biogenesis [BR:
yas03009
]
Prokaryotic type
rRNA helicases
N0H69_02330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UWM45711
LinkDB
All DBs
Position
508163..510139
Genome browser
AA seq
658 aa
AA seq
DB search
MTTELETSFADLGLSAPILSALTALGYEKPSPIQLECIPHLLNGRDVLGMAQTGSGKTAA
FGLPLLHNIDPELKAPQVLVLAPTRELAIQVAEALTSFSKDIKGVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLKRGTLNLSNLKGLVLDEADEMLRMGFIEDVENILAQIPA
EHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQVYWKVGGGYRKNEALVR
FLEAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDI
LIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLQ
NIERTMKLTIPEVELPNAQLLSERRLAKFAAKVSQQLESSDLDMYRALLAKLQPEEEFDI
ETLAAALLKMAQGERPLILPPEAPRRPQREFNSRDDRGSDRGRDRDRGDSRRDSRPDSRD
GGERPARRERRDVGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHST
IELPKGMPGEMLSHFTRTRILNKPLNMQLLGDAQPHERRERPAGGNGGERRGGGRSFGGE
RRDGAGAPPRRSFGSDRAPAAGGERRPPRDAQRSSAPRRDDAAAPAAPAPARRRFGDA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgactactgagcttgaaacctcttttgctgatttggggctgtctgctcctattctttcc
gcccttactgctttgggttacgaaaaaccatctccaattcaattggaatgtattccacac
ctgttgaacggtcgcgatgttcttggtatggcgcaaaccggtagtggtaaaactgctgct
ttcgggcttccgctgttgcacaacattgacccagaactgaaagcgccacaggtgctggta
ctggctccaacccgtgagttggcgattcaggttgctgaagcattaactagcttctctaaa
gatattaaaggcgttaacgttgtggccctgtacggcggccaacgttatgacgttcaatta
cgcgctttgcgccaggggccacaagttgttgttggcaccccaggtcgtctgttagaccac
ctgaaacgcggtacccttaatctgtccaacctgaaaggtttagtgctggacgaagcagat
gaaatgctgcgcatgggctttatcgaagacgtcgaaaatattttggctcagatcccagct
gaacatcagactgcgctgttctctgcgactatgcctgaagcgattcgccgtattacccgt
cgctttatgaaagagccacaggaagtacgtattcagtctagcgtgacgactcgccctgac
attagccaagtttattggaaagtgggcggtggctatcgtaaaaacgaagcactggttcgt
ttccttgaagctgaagattttgatgcggcgatcattttcgtccgtactaaaaacgccact
ctggaagttgcagaagcccttgagcgtagcggttatagcagcgctgcactgaacggcgac
atgaaccaggccctgcgtgagcagactctggaacgtctgaaagatggtcgtttggatatc
ctgattgcaactgacgttgctgcacgtggcttggacgttgagcgcatcagtctggttgta
aactatgatatccctatggattcagagtcttacgttcaccgtatcggccgtaccggtcgt
gcaggtcgtgctggccgtgcgttactgttcgttgagaaccgtgaacgtcgtctgttgcag
aacattgaacgtaccatgaaactgactatccctgaagttgagctgccaaatgcacaactg
ctgagcgagcgtcgtttagctaagtttgctgctaaagttagccaacagctggaaagtagt
gacttggatatgtaccgtgcattgctggctaaattgcaaccagaagaagagtttgatatc
gaaactctggctgctgcactgctgaaaatggcacagggcgaacgtccgctgatcttgcca
ccagaagctccacgtcgtccacagcgcgaattcaattctcgcgatgatcgtggtagcgat
cgtggccgtgaccgtgatcgtggtgacagccgtcgtgacagccgccctgacagccgtgat
ggtggcgagcgcccagcacgtcgtgaacgtcgtgatgttggcgaaatggaactgtaccgc
attgaagtgggccgtgatgatggtgttgaagttcgtcatatcgttggcgctatcgctaac
gaaggtgatatcagcagccgttatatcggtaacatcaagctgtttgcttcccactcaact
atcgagctgccaaaaggcatgccgggtgaaatgttatctcacttcacccgtacccgtatc
ctgaacaagccgctgaacatgcagctgttgggtgatgcacagccacatgagcgccgtgag
cgtccagctggcggtaacggtggtgagcgtcgtggcggtggccgttcattcggtggcgaa
cgtcgtgatggtgccggtgctcctcctcgtcgttcattcggcagcgatcgtgctccagcc
gctggtggcgagcgtcgtccaccacgtgatgctcaacgttcatctgcaccacgtcgtgat
gatgccgcagcacctgctgctccagcaccagcgcgtcgtcgtttcggtgatgcataa
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