Yersinia alsatica: N0H69_02385
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Entry
N0H69_02385 CDS
T08521
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
yas
Yersinia alsatica
Pathway
yas00330
Arginine and proline metabolism
yas00480
Glutathione metabolism
yas01100
Metabolic pathways
yas01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
N0H69_02385 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
N0H69_02385 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
N0H69_02385 (speF)
Enzymes [BR:
yas01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
N0H69_02385 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
UWM45720
UniProt:
A0ABY5UT73
LinkDB
All DBs
Position
complement(519877..522036)
Genome browser
AA seq
719 aa
AA seq
DB search
MKKLNIAASTSAITCFESQREVVDVLHTDFTDVAAVVLSVQDINNGVIDSIHSLGLEIPI
FAAVCCEEELNTDVLPSLNGVFELCGDNTDFYGKQLESAAEKYEKELLPPFFSTLKKYVE
MGNSTFACPGHQGGQFFRKHPAGRQFFDFYGETIFRSDMCNADVKLGDLLIHEGAPCDAQ
KHAAKVFNADKTYFVLNGTSASNKVATNALLARGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFEEKYLREQIRSVAPDRANEARPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQDRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGKSGQRM
WLDCVKTGIEARKMILNTCSMIKPFVPVEVDGKPWQQYDTDAMAQDLRFFNFIPGEKWHA
FEGYEESQYFVDPCKLLLTTPGIDTNTGEYTASGIPATILANFLRENGIVPEKCDLNSIL
FLLTPAEDLAKMQHLVAQIARFERFIEEDALLSDVLPTVYRNNETRYKGYTIGKLCQEMH
DLYVSYDVKQLQKEMFRKQYFPKVMMNPQDANIEFVRGHAELVPLCKAEGRIAAEGALPY
PPGVLCVVPGEVWGGAAQRYFLALEESINLLPGFAPELQGVYLQVDEDGWNRAYGYMMK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaaatatcgcggcaagtacatcagctataacttgctttgaatcacagcga
gaagtagtggatgttttacacacggattttactgatgttgctgccgtcgtactttctgtt
caggacattaataatggtgtgattgatagcatccattcattaggtcttgaaattccaatt
ttcgcggctgtttgttgtgaagaagaattaaataccgatgtattaccgtctttaaacggg
gtatttgaactgtgcggtgacaatactgacttttacggtaaacaactggaatcagcagct
gaaaaatatgaaaaagagttgctgccccccttctttagtacattaaaaaaatatgtagaa
atggggaattcaacctttgcttgcccagggcatcagggtggtcaattcttccgtaagcat
ccggctggtcgtcaattttttgacttctacggcgaaactattttccgctcggatatgtgt
aatgctgacgtaaaattaggtgacttgctcattcacgaaggtgcgccttgcgatgctcaa
aaacatgcggcgaaagtatttaatgccgataaaacctatttcgtactgaacggcacatct
gcctcaaataaagtggcaaccaatgcactattagcccgtggcgacttggtgttgtttgac
cgtaataaccataaatctaaccaccatggcgcactaattcaagctggcgcaaccccagta
tatctggagactgcccgcaatccatttggcttcatcgggggtatcgacgctcactgtttt
gaagaaaaatacctgcgtgaacaaatacgtagcgtagctcctgaccgtgctaatgaagcg
cgcccattccgtctggcaatcatccagttggggacttatgacggcacaatttataatgcc
cgtcaggtagtggataagattggccacctctgtgactatattctgtttgactcagcgtgg
gtgggttacgagcaatttattccaatgatgaaagattgttcaccattattacttgaactg
aatgaaaacgatccgggcattatcgttactcaatcagtgcataaacaacaagctggtttt
tcacaaacttcgcagattcataagaaagataaacatattaaaggtcaggatcgttactgc
aatcataaacgctttaataatgcctttatgctgcacgcatccaccagcccattctatcca
ttatttgctgcattagatgttaatgcgaaaatgcatgaaggcaaaagtggtcaacgcatg
tggttagattgtgttaaaaccggtattgaagcccgtaaaatgattttaaatacctgtagc
atgattaagccttttgttccggtagaagttgatggcaaaccatggcaacaatatgacact
gatgctatggcgcaagacttgcgcttctttaatttcattcccggcgaaaaatggcatgct
tttgaaggttatgaagagtcacaatattttgttgacccatgcaaactgttattaaccacc
ccaggcattgataccaatactggcgaatatactgcatccggtattccagcaactattctg
gctaatttcctgcgcgagaatgggattgtgccagagaaatgtgaccttaactccatcctg
ttcttattaacgccggcagaagacttggcgaaaatgcaacatttggtagcgcaaattgcc
cgatttgaacgtttcattgaagaagatgcactgctaagcgatgtattaccgacggtttac
cgtaataacgaaactcgctacaaaggttataccatcggtaaattatgtcaggaaatgcat
gacctttatgtcagctacgatgttaaacagctgcaaaaagagatgttccgcaaacagtat
ttccctaaagttatgatgaatcctcaagatgctaatattgaattcgtccgtgggcatgct
gaattagttccattgtgtaaagcagaaggtcgaattgccgctgaaggcgcactgccttat
ccaccgggagtattgtgtgttgtccctggtgaagtatggggcggagctgctcaacgttat
ttcctggcacttgaagaaagtattaacttattgccaggctttgcacctgaattacaaggt
gtttatttacaagtcgatgaagatggatggaaccgcgcatacggctatatgatgaaataa
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