Yersinia alsatica: N0H69_07720
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Entry
N0H69_07720 CDS
T08521
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
yas
Yersinia alsatica
Pathway
yas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N0H69_07720 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yas03400
]
N0H69_07720 (recB)
Enzymes [BR:
yas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
N0H69_07720 (recB)
DNA repair and recombination proteins [BR:
yas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N0H69_07720 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UWM47327
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All DBs
Position
1767880..1771509
Genome browser
AA seq
1209 aa
AA seq
DB search
MTSMTPQRLEPLTLPLYGERLIEASAGTGKTFTIGVLYLRLLLGLGGEAAFSRPLMVEEI
LVVTFTEAATEELRGRIRDNIHGLRIACVRGVSDDPMHKALLAEITDLGEAAAQLLAAER
QMDEAAIYTIHGFCQRMLANNAFESGILFEQTLVQDELPLRRQACADFWRRHCYPLPLTI
ARAVSQEWSGPEALLKDLAAYLQGETPKFRQAPGEDETILSRHQQIVVQIDAVKEQWRAA
AHELEALISGSGVDKRSYSSKHLPNWLEKVGIWAAQETGDYQLPKELEKFRQSVLLEKTK
KGAAPQHALFSVIDRIYEQPLTLRDLILARAISEIRTSVQQEKRQRAELGFDDLLSKLDA
ALQQPGGELLAQAIRTRYPVAMIDEFQDTDPQQYRIFHTLYGGQGDCGLLLIGDPKQAIY
AFRGADIFTYIRARSEVSARYTLETNWRSSFPMVQSVNRLFSLVKVPFLFEQIPFINVAP
AEKNSQLSFEIKGKKQPALSFWLQPGEGVGVSEYQQLMARQCAAQIRDWLTAGQQGLAQL
VTAKGARPVQASDITILVRSRAEAALVRDALSALAIPSVYLSNRDSVFDTTEAKDLLWLL
QAVLAPEQERALRSAMATGILGLDAQMLDALNHDERAWDALVDEFDGYRQHWQRRGVLPM
LREVMAHRHLAENLLATPGGERRLTDVLHLGELLQEAASQLDSEHALIRWLAQQIAQPNH
QSDNQQLRLESDRHLVQVITIHKSKGLEYPLVWLPFVGNFRQQQDVLYHDRHSFEALLDL
NADEESQALAEEERLAEDLRLLYVALTRAVYHCSVGIAPLIKGGRKKQGDSDMHLSALGY
LVQQGQAGDAQYLADKLAELTTLAAGDITVSTAGQLNETPWQPQPEALPALAARQFSRQI
HDYWRVTSYSGLQQHGSSKNGISPVLNVPLQELLPRLDTDAAGEQAVITENRLTPHTFPR
GAAPGTFLHDLLEPLDFSQPIDQEWLTEQLQLQGFGEQWSPMLHQWLNDIVQVPLNETGV
TLAGLTPQSKQAELQFYLPIDALLQARELDALIKHYDPLSRQCPVLDFQQVRGMLKGFID
LVFCWQGKYYLLDYKSNWLGEDSSAYTAEAMTQAMAEHRYDLQYQLYTLALHRYLRHRLA
NYDYQRDFGGVIYLFLRGVDKQHPGNGIFSCRPEWELIEGMDNLFSGRAFELQFSDEGGS
ASIDERDAI
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgactccccagcggctggagccgctaacgctgcccttgtatggcgagagg
ctgattgaagcctctgccggtactggtaaaacttttaccattggggtgctttatctcaga
ttattgctgggcttaggtggagaggcagcatttagccgccctctgatggtagaggagatc
ctggtggtgacctttaccgaggcggcaactgaagagttaagggggcgaatccgcgacaat
attcatgggttgcgcatcgcgtgcgtgcggggagtcagtgatgatccaatgcataaagct
ttacttgctgaaattaccgatctgggcgaggccgcagcacaattgctggcggccgagcgc
caaatggatgaagcggcaatttacaccattcatggcttctgtcagcgaatgctggcgaac
aatgcatttgagtctggcattttatttgagcaaacattggtgcaagacgaactgccacta
cgcaggcaagcttgtgccgatttttggcggcgtcactgttatccgctcccattgacgatc
gctcgggcggtcagtcaagaatggagtggcccggaagctctgcttaaagaccttgctgct
tatttacagggtgagacgcctaaatttcgccaagcacccggtgaagatgaaacgatactc
agccggcatcaacaaattgtggtgcaaattgatgcggttaaagagcagtggcgtgctgct
gcccatgagttagaggctttgattagtggttctggtgtcgataagcgcagctacagcagt
aaacatttgcctaactggttagaaaaagtcggtatttgggcagcacaagaaaccggtgac
taccaattacccaaagagctggaaaaatttcgccagtcagtattattggaaaaaaccaaa
aaaggagccgccccccagcatgctctattcagtgtaatagaccgaatatatgaacaaccg
ctgacactaagagatctgattttagccagagccatcagtgagatacgcacctccgttcag
caggaaaaacggcagcgagcagagctggggtttgatgacctgctcagcaaactggatgcg
gcattacagcaaccgggtggggagttattggctcaagctatccgtactcgttatcccgta
gccatgattgatgagttccaggataccgatccgcaacaatatcgtattttccacacgctg
tacggtggacaaggtgactgtggcctattgctgatcggcgatcctaaacaggctatttat
gcattccgtggtgccgatatttttacctatattcgtgcccgttcagaagtaagtgcccgc
tacacactagagacaaactggcgttcatctttcccgatggtgcaatcagtaaacaggcta
tttagtttggtcaaagtccctttcttatttgagcaaatcccgtttataaatgtggcgcct
gcagaaaaaaatagtcagctatcatttgaaataaaagggaaaaaacaacctgcgctctct
ttctggctacagccaggagaaggggttggtgtgagtgaatatcaacaattaatggcgcga
cagtgcgcagctcaaattcgtgactggttaactgcgggtcagcaagggctggctcaatta
gtgaccgccaaaggtgcaaggccggttcaggcatctgatataaccatattggtacgtagc
cgggcagaggcggcattggtgcgagatgcactgagtgcgttggctatcccatcggtttat
ttgtctaatcgtgacagcgtattcgacaccacggaagccaaagacttgctgtggctattg
caggcggtgctagctcctgaacaggaacgggcattacgcagcgctatggcgactggaata
ttggggctggatgcccaaatgttggatgcattaaatcacgatgagcgggcttgggatgct
ttggtagatgaattcgatggctatcgccagcattggcagcgtcgtggtgtgctgccaatg
ctgcgggaggttatggcgcaccgccatttagcggaaaacctgctagctacccccggcggg
gaaaggcggctaacagacgtgctgcatctgggggagttattgcaagaggctgcatcacag
cttgatagtgagcacgcactaatccgctggttggcacaacaaatagcacagccaaatcat
cagtcagataaccagcaattgcgtttggaaagtgaccgccatttagtgcaagtcattact
atccataaatcgaaagggctggaatatccattggtatggctgccttttgtggggaatttc
cgccagcaacaggatgtgctctaccatgatcgccacagctttgaagcattgcttgacctc
aatgcggatgaagagagtcaggctctggcggaagaagagcgtctggcggaagacctgcgg
ttattatacgtggcacttacccgcgcggtttatcattgcagcgtgggtattgctccgctg
attaaaggcgggcgaaaaaagcagggtgatagtgacatgcaccttagtgcattaggctat
ttggtgcagcaagggcaagctggagatgcacagtatctggctgacaaacttgcagagcta
accacattggctgcgggcgatattactgtatcgactgcagggcaactgaatgaaacacct
tggcaaccgcagccggaagcgttgccagctctggcggcgcgtcagtttagccgacagata
cacgattattggcgagtcaccagctattccggcctacagcagcatggttccagtaaaaac
ggcatatcaccagtattaaatgtgccattacaagagttattaccccggctggacaccgat
gctgcgggtgaacaagcagtaataaccgagaaccgcttaacgcctcatactttcccgcgc
ggtgctgcgccgggtactttcctgcatgacctacttgaacctttggattttagccaaccc
attgatcaagaatggcttaccgaacaattacagctgcagggctttggtgagcaatggtca
cccatgctacatcagtggctaaacgacattgtacaagtcccgctgaatgaaacgggtgtg
acgctggcggggctaacgccacagagcaagcaggcggaattacaattttacctgccgatc
gacgcgctgctacaagcgcgagagttagacgccttaatcaagcactatgacccactttct
cgccagtgcccggtattggattttcagcaagtaagagggatgcttaaaggatttattgac
ttggttttctgctggcaaggcaaatattacttactggattacaagtctaactggttgggt
gaagacagcagtgcttataccgctgaagcgatgacccaagccatggctgagcatcgctat
gacctgcaatatcaactatatactctggctttacaccgctatctgcgtcatcggttagcg
aattatgattatcaacgtgactttggtggcgtcatctatctcttcctgcgtggagtcgat
aagcagcatccgggtaacggtatttttagctgccgcccagaatgggagttgattgaagga
atggacaatctattcagtggtcgtgcttttgagctgcaattcagtgatgaaggtggctcc
gcctcgatagatgagagggacgcaatatga
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