Yersinia alsatica: N0H69_08510
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Entry
N0H69_08510 CDS
T08521
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
yas
Yersinia alsatica
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yas03009
]
N0H69_08510 (srmB)
Enzymes [BR:
yas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N0H69_08510 (srmB)
Ribosome biogenesis [BR:
yas03009
]
Prokaryotic type
rRNA helicases
N0H69_08510 (srmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UWM46831
LinkDB
All DBs
Position
complement(1921851..1923167)
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AA seq
438 aa
AA seq
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MTVTNFSELDLDERLIDALRDKGYERPTAIQAAAIPPAMDGRDVLGSAPTGTGKTAAFLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKHTQLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAAETRW
RKQTLLFSATLEGEAIREFAERILNEPVELEADPSRRERKKILQWYYRADNIEHKTALLV
HLLKQPEVQKSIIFVRTREKVHQLVSWLREAGINAWFLEGEMVQAKRTEAVIRLSDGRVN
VLVATDVASRGLDIDDISHVFNFDLPLTADVYLHRIGRTGRAGRKGVAISLVEAHDHLLL
GKIGRYLKEPLKPRVVDELRPTSKAPSEKTTGKPSKKVLAKRKELKETSKEKAKVKVRHR
DAKNVGKRRQPKDKPDTK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccaatttttccgaactcgatctcgatgaacgcctgattgacgcactgcgc
gacaaaggctatgagcgcccaactgccattcaagctgcggctattccgccagctatggat
gggcgcgatgtattgggttcggcaccaacaggtacgggcaaaactgccgcctttttgctg
ccagccttgcagcatttgctggatttcccacgcaaaaaatctggcccgccacgtattctg
atcctgacgccaactcgtgaattggcgatgcaggttgcggatcaggcgcgtgaactggct
aagcatacgcaactggatatcgcgacgattaccggtggtgtggcttatatgaaccacgcg
gaagtctttagtgagaatcaagatattgtcgtggcgaccactggccgtttactgcaatac
atcaaagaagaaaactttgactgccgtgctgtagaaaccctgattctggacgaagctgac
cgcatgctggatatgggcttcgcacaggatattgaaaccattgcagcagaaactcgctgg
cgtaagcagacattattgttctctgccacgctggaaggtgaagctatccgtgaatttgcc
gagcgcattctgaatgagccggtagagctggaagccgacccatcgcgccgcgaacgcaaa
aagattttgcaatggtattaccgcgcggacaatattgaacacaaaaccgccttgctggtg
catctgctcaagcaaccggaagtgcaaaaatccattatttttgtccgtacccgtgaaaag
gtacaccaactggtcagttggctacgtgaagccggaattaacgcctggttccttgaaggc
gagatggtccaggccaaacgtaccgaagccgttatacgtttaagtgatggccgggttaac
gtcttggtggcgaccgatgtcgcgtcacgcggtttggatatcgatgatatcagccacgta
ttcaactttgatttgccgctgaccgctgacgtctatctgcaccgtattggtcgtacaggc
cgtgcggggcgtaaaggtgtcgctatctcactggttgaagcgcatgaccatttgttgctg
ggcaaaattggccgttatctgaaagagccactgaagccgcgtgttgttgatgagttacgc
ccaaccagcaaagcaccaagcgaaaaaaccacgggtaagccgtcgaagaaagttttagcg
aagcgcaaagagctaaaagaaaccagtaaagagaaagcaaaggttaaggttcgtcatcgt
gatgccaagaatgttggcaaacgccgccaaccaaaggataaacctgataccaaatag
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