Yersinia alsatica: N0H69_08560
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Entry
N0H69_08560 CDS
T08521
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
yas
Yersinia alsatica
Pathway
yas03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
N0H69_08560 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yas03019
]
N0H69_08560 (rnc)
03009 Ribosome biogenesis [BR:
yas03009
]
N0H69_08560 (rnc)
03036 Chromosome and associated proteins [BR:
yas03036
]
N0H69_08560 (rnc)
Enzymes [BR:
yas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
N0H69_08560 (rnc)
Messenger RNA biogenesis [BR:
yas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N0H69_08560 (rnc)
Ribosome biogenesis [BR:
yas03009
]
Eukaryotic type
90S particles
RNase
N0H69_08560 (rnc)
Prokaryotic type
rRNA processing factors
N0H69_08560 (rnc)
Chromosome and associated proteins [BR:
yas03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
N0H69_08560 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
UWM46841
UniProt:
A0ABY5UTM6
LinkDB
All DBs
Position
1933015..1933695
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFQQQELLLQALTHRSASSKHNERLEFLGDSILSFVIANELYRRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIHTIERLILDWYRSRLEEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLNEPVVGTGSSRRKAEQAAAEQALKQLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaataaataggctacagcggaagctgggctacacttttcaacagcag
gagctcttgctgcaagcactgactcatcgtagcgccagcagcaaacacaatgagcgtttg
gagttcctgggtgactctatattaagttttgttattgccaatgagttgtaccgccgtttc
cctcgagtcgatgaaggggatatgagtcggatgcgagcaacattggtaagaggtaataca
ctagccgaaatggcccgtgagtttgacctcggtgaatgtttacgccttgggccgggtgaa
ttgaaaagtggcggttttcgtcgcgaatcaattttggcggataccgtagaagccttaatt
ggcggtgtattcctagatagcgatattcatacaattgaacggctgattctcgactggtat
cgcagtcgcttagaggaaatcagccctggtgataagcagaaagacccaaaaacgcgcttg
caagaatatttgcagggccgtcatctgccattgccttcttatctggttgtgcaggttcgt
ggagaagcacatgatcaggaatttactatccactgccaggtgagtggcttgaatgaaccg
gtagtaggtaccggctcaagtcgccgtaaggctgagcaggcggcagcggaacaagcgctg
aaacagttggagcttgaatga
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