Yersinia alsatica: N0H69_12370
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Entry
N0H69_12370 CDS
T08521
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
yas
Yersinia alsatica
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yas03009
]
N0H69_12370 (dbpA)
Enzymes [BR:
yas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
N0H69_12370 (dbpA)
Ribosome biogenesis [BR:
yas03009
]
Prokaryotic type
rRNA helicases
N0H69_12370 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Helicase_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
UWM43526
LinkDB
All DBs
Position
2804356..2805738
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AA seq
460 aa
AA seq
DB search
MSTTSFSSLTLPAEQLSNLNELGYTEMTPVQAAALPAILNGQDVRAKAKTGSGKTAAFGI
GLLDKIAVGEFVTQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGHQLDSL
VHAPHIVVGTPGRIQEHLRKKTLVLDDLKILVLDEADRMLDMGFTDAIDDVIAYTPPQRQ
TLLFSATYPAGIERISAGVQRQPVNVEVEDGDEAPAIEQVFFETTREKRLPLLIAVLSHY
QPASCVVFCNTKKDCQSVFEALESRGISVLALHGDLEQRDRDQVLVRFSNRSCRVLVATD
VAARGLDIKDLELVVNFELAFDPEIHVHRIGRTGRAGMSGLAVSLCTPQEMARAHAIEDY
LQIKLKWTPAEQVSRSTNVMLEPEMVTLCIDGGRKAKIRPGDILGALTGDAGLTATDVGK
IDMFPVHAYVAIRKACAKRALAQLQQGKIKGKNCKARLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacaacttccttttcttccctgacactgcctgctgagcagttgtccaatcttaat
gaacttggctataccgagatgacaccggtacaagccgcagcgttaccggcaatcctcaat
gggcaggatgtccgggcaaaagccaaaaccggcagtggtaaaactgcggcctttggtatt
ggtttgctagataaaattgctgtcggcgagtttgtcacgcaggcgctggtattgtgccca
acccgcgagctggctgatcaggtcagcaaagagttacgccgcttggctcgcttcacccag
aatattaaaatcctgacactgtgcggtggccaaccaatgggccatcaactggactctttg
gtgcatgcgccacatatcgtggtagggacgccggggcgtattcaggaacatttgcgtaag
aaaacactggtactggatgacctcaagattttggtattggatgaagccgatcgcatgctg
gatatgggttttaccgatgccattgacgatgtgattgcctacaccccgccacagcgccaa
actttattgttctctgccacttatccggcgggtattgagcgcatcagtgcgggggttcag
cgccaacccgtcaatgttgaagttgaagatggtgatgaagcaccggccattgagcaggtc
tttttcgaaaccacccgtgaaaagcgtctacctctgttgattgcggtcctcagccactat
caaccggcttcttgcgtggtgttctgtaacaccaagaaagattgccaaagtgtgtttgaa
gccttggaatctcgtggtatcagcgtgctggctctgcatggtgacttagagcaacgcgac
cgtgatcaggtgttggtacgcttctctaatcgtagctgccgggttttggtggccacagat
gtcgcggcccgtggtctggatattaaagacttggagttggtggttaacttcgagctggca
tttgatcctgaaattcatgtgcaccgtattggccgtaccggtcgggcaggaatgagtggc
ctagccgtgagtctgtgtacgccacaagagatggctcgcgcccatgccattgaagattat
ctgcaaatcaaactgaaatggacgccagcagagcaggtaagccgcagtacgaacgtcatg
ctcgaacctgaaatggtgacactatgtattgatggcgggcgtaaagcgaaaattcggcca
ggggatattctgggcgcattaaccggggatgccggtctgactgcgacggatgtaggtaaa
attgatatgttcccggtccatgcttatgttgcgatccgcaaggcttgcgctaaacgcgct
ctggcacagttgcagcaaggcaagatcaaaggcaaaaactgtaaagcccgtttattaaaa
taa
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