Yersinia alsatica: N0H69_14585
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Entry
N0H69_14585 CDS
T08521
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
yas
Yersinia alsatica
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yas03032
]
N0H69_14585 (topA)
03400 DNA repair and recombination proteins [BR:
yas03400
]
N0H69_14585 (topA)
Enzymes [BR:
yas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N0H69_14585 (topA)
DNA replication proteins [BR:
yas03032
]
Prokaryotic type
DNA Topoisomerases
N0H69_14585 (topA)
DNA repair and recombination proteins [BR:
yas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N0H69_14585 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
UWM43940
LinkDB
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Position
complement(3270511..3273126)
Genome browser
AA seq
871 aa
AA seq
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MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSANSTEDKAKKADK
PKTKVKKDEKVALVNRMGVDPYHGWKAQYEILPGKEKVVAELKALAENADHIYLATDLDR
EGEAIAWHLREVIGGDDKRFSRVVFNEITKNAIQQAFNQPGELNINRVNAQQARRFMDRV
VGYMVSPLLWKKIARGLSAGRVQSVAVRLVVERERDIKAFVPEEYWELHADLLAKGEVPI
QMEVTHAHDKPFKPVNREQTHAALKLLENARYKVLDREDKPTSSKPGAPFITSTLQQAAS
TRLSFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQDALTMVRGYIGDNFGDKYLPSAPNQ
YSSKENSQEAHEAIRPSDVNVLAEQLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLT
VQAGDFQLRAKGRTLRFDGWTKVMPALRKGDEDRTLPVIEVGSELDLQKLIPSQHFTKPP
ARYSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENF
RELMNYDFTARMESGLDQVANDQAEWKAVLDGFFAEFSEQLEKAEKDPEEGGMRPNQMVM
TSIDCPTCGRPMGIRTASTGVFLGCSGYALPPKERCKTTINLVPEAEILNILEGDDAETN
ALRARRRCQKCGTAMDSYLIDNQRKLHVCGNNPACDGYEIEEGEFRIKGYEGPIVECEKC
GSEMHLKMGRFGKYMGCTNDECKNTRKILRSGEVAPPKEDPVPLPELPCEKSDAYFVLRD
GAAGVFLAANTFPKSRETRAPLVEELVRFKDRLPEKLRYLADAPVTDKEGNKTMVRFSRK
TKQQYVSSEKDGKATGWSAFYIDGKWVEAKK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtaatagttgagtccccggcaaaagccaaaactattaataaatat
ttagggaatgactacgtggttaagtccagtgtcggtcacattcgtgatttgccgaccagt
ggctcagccagtaagaagagcgctaactcaactgaagataaagccaagaaagctgacaag
cccaaaactaaagtaaagaaagacgaaaaggttgccttagttaaccgtatgggcgtcgat
ccttatcatggctggaaagcgcagtatgaaattttgcccggcaaagagaaagtggttgcc
gagctgaaagcattagctgaaaacgctgaccacatctatctcgcaaccgaccttgaccgc
gaaggagaggctattgcctggcatttgcgggaagtgattggtggtgacgataagcgtttc
agccgtgtggtatttaacgaaatcactaagaacgccatccaacaggcgtttaatcaacct
ggtgaattaaatatcaaccgggttaatgcccaacaagcccgtcgctttatggaccgggta
gtgggttatatggtttcgccactgctgtggaaaaagattgcccgtggcctgtcagcaggg
cgcgtacagtcggttgcggtgcgtctggtggtggaacgcgaacgtgacatcaaagcattc
gttcctgaagagtattgggaactgcatgccgacttgctggcaaaaggtgaagttccgatt
caaatggaagtcactcatgcgcatgacaagccatttaaaccggtaaatcgcgagcaaact
cacgccgcgcttaaactgctggaaaatgcccgctataaagtgctggatcgcgaagataaa
ccgaccagtagcaagccgggtgcaccatttattacttccaccttgcaacaggctgccagt
acccgcctgagttttggtgtgaagaaaactatgatgatggcgcagcgcttgtatgaagcg
ggtcatatcacctatatgcgtactgactccaccaatttaagtcaagatgcactgactatg
gtgcgcggttatattggcgataattttggtgataaatatctgccatcggcgccaaatcag
tacagcagcaaagaaaactcacaagaagcgcatgaagctattcgtccttctgatgtgaat
gtgctggctgaacagttaaaagatatggaagccgacgctcagaagctgtatcagctgatt
tggcgtcagtttgtagcctgccagatgacaccggccaagtatgattctacgacactgact
gtgcaggcgggcgatttccaactgcgtgctaaaggccgtaccttacggtttgatggttgg
accaaggtgatgccggcactgcgtaaaggtgatgaagaccgcaccttgccagtgattgaa
gtgggtagtgagttggatttacaaaaactgattccaagccagcacttcaccaagccaccg
gcacgatacagtgaagcatcactggtaaaagagctggaaaaacgcggtattggccgccca
tccacttatgcgtcgattatttcgaccattcaggatcgtggctatgtgcgggtagaaaac
cgccgtttctatgcagagaaaatgggtgaaatcgtcactgaccgtctggaagaaaacttc
cgcgagttgatgaattacgacttcaccgcgcgcatggaaagtggtttggaccaagtcgcc
aatgatcaggctgagtggaaagcggtgctggatggtttcttcgccgaattcagtgagcag
cttgaaaaagccgaaaaagatcctgaagagggcggtatgcgcccaaatcagatggtgatg
accagcattgactgcccaacctgtggccgtcctatggggattcgtaccgctagcacgggc
gtgttcttaggatgctcgggttatgcattgccgcctaaagaacgttgcaagaccaccatt
aatctggtgccagaagctgaaattctgaatatcctggaaggtgatgatgcggaaactaac
gcattacgcgcccgccgccgctgccagaaatgtggcacagccatggatagttatctaatc
gataaccaacgtaaattacatgtttgcggtaataacccggcatgtgatggttatgagata
gaagaaggcgagttccgtatcaaagggtatgaaggcccaattgttgagtgcgagaaatgt
ggttctgaaatgcacctgaaaatggggcgttttggtaagtacatgggctgtaccaatgat
gagtgcaaaaacacccgtaaaatcttgcgcagtggtgaagttgcgccaccgaaagaagat
ccggtcccgttaccagaattgccatgtgaaaagtctgatgcctattttgtattgcgagat
ggtgcagcaggcgtattcctggcggccaataccttccctaaatcgcgcgaaacccgtgcg
ccattggtagaagagttggtgcgtttcaaggaccgtttacctgaaaaattacgttacctg
gctgatgcgccagtgacggataaagagggtaataaaaccatggtgcgctttagccgtaaa
accaaacaacagtatgtttcgtcagagaaagatggcaaagctaccggttggtctgctttc
tacatcgacggcaaatgggttgaagctaaaaaataa
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