Yersinia alsatica: N0H69_17965
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Entry
N0H69_17965 CDS
T08521
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
yas
Yersinia alsatica
Pathway
yas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N0H69_17965 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yas03019
]
N0H69_17965 (rhlE)
Enzymes [BR:
yas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N0H69_17965 (rhlE)
Messenger RNA biogenesis [BR:
yas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N0H69_17965 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
AAA_22
Shikimate_DH
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UWM44536
LinkDB
All DBs
Position
complement(4017945..4019300)
Genome browser
AA seq
451 aa
AA seq
DB search
MSFDSLGLNADILRAVEEQGYLVPTPIQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLSQNQQPIKGRRPVRALILTPTRELAAQIDENVQSYSKYLKLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKRELLSQMI
GEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCVDEHKLLRDI
ERLLKREIPRIALDGYEPDPSIKADPIQNGRQGRGAQRPGMGRGSNAGRPQNGGGAAGRG
DSRNSRPRSQADGQRRPAGPSSRGRSRNPGE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggcttaaacgccgacatcctgcgtgctgttgaagagcagggc
taccttgtgccgacgccaattcagcgtcaggcaatccctgtggtactggaaggccgtgat
ttaatggccagtgcgcaaaccggtaccggtaaaaccgctggtttcaccttgccgctgttg
caactgctgagccagaaccaacaacccattaaaggccgtcgtccggtacgtgcgttgatt
ttgacgccaacccgcgaactggctgcgcagattgacgaaaacgtacagagttacagcaaa
tacctgaagctgcgttcgctggtggtatttggtggcgttagcattaacccacagatgatg
aaattgcgtggtggtgttgatatcttggtcgcaacacctggccgtctgctggatctggaa
caccagaatgcagttgatctgtccaagattgagattttggtattggacgaagccgaccgc
atgctggatatgggctttattcacgatatccgtcgtgtattggcaaaactgcctgctaaa
cgccagaatctgctgttctccgcgactttctctgatgaaattaaaggcttggccagcaaa
ttgctgcacaaccctgcttcagttgaagtggctcgtcgtaacaccgcttctgagcaaatt
gcacaaagtgttcattttgtggataaaaaccgcaaacgtgaattattgtctcagatgatt
ggcgaaggtaattggcagcaagtattggtgttcaaccgcaccaagcacggcgctaaccat
ttagctgagcagctgaataaagacggcattactgccgcagctattcatggtaataagagc
caaggggcgcgtactcgtgcactggctgattttaaagacggcaaaatccgtgtattggta
gcaactgatatcgccgcccgtggtttggacatcgaccagttgcctcatgtggttaactat
gagttgccaaacgtaccggaagattacgtgcaccgtattggtcgtactggccgcgcggaa
cgtaccggtgaggcgatttcattggtttgtgttgatgaacacaaattgctgcgtgatatc
gagcgtttgctcaaacgtgaaattccacgtatcgcactggatggctatgagccggaccca
agcattaaagcggatccgattcaaaatggccgtcagggccgtggcgcgcaacgtccagga
atgggccgtggcagcaacgccggtcgtccgcaaaatggtggtggcgcagcaggtcgcggt
gatagccgtaacagccgcccacgcagccaggctgatggtcaacgtcgcccggcaggccca
tcttcacgtggtcgtagccgtaatcccggcgaataa
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