Yersinia alsatica: N0H69_19960
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Entry
N0H69_19960 CDS
T08521
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
yas
Yersinia alsatica
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yas03400
]
N0H69_19960
DNA repair and recombination proteins [BR:
yas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N0H69_19960
Archaeal homologous recombinant proteins
N0H69_19960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
nSTAND3
cobW
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UWM44886
LinkDB
All DBs
Position
4409627..4413316
Genome browser
AA seq
1229 aa
AA seq
DB search
MRILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGTRYRAFWSQRRAKNSPEGNLQAPKVELALCED
GKILADKVRDKLDMVAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTDI
YGRLSEHVFEQHKQAKISLDALHQRASGIELLNEEQRLAVAQQIDALGEQEKQLTSEQQT
NQKQINWLVGWQQQQKNLLEFQQQQKLIEQEYQQAQPELQRLARSEPAEKLRPLLRECSR
SQQDLQQIQLRVTTLAQQQQQLQAQLTPLAEALEQANLARQQQATKQHEQETLIEQKVVP
LDNLITQQQHLLAQLATQLQQLRGKEQQSKQQLELNERQLQQTHQRLQQLAEYAHINAHH
QHWEKNLPLWREQFRQLHIQQQQSVESEQQLQQLVTLLNNLQQQTATLNEQDKQQQAALV
QANLQASSIQQQLSALEQLHPSAQLRHQLSELQQQRAVRQQLAALSPLAQQVQTQHDKQQ
QQLISQQQQLKQLEQQLAEKRQRYKQQKQHLTDLEALLDREKQIVRLEAERAKLQPGDAC
PLCGAVDHPAITEYQAVKPSETAVRVEALRLQVEQLFTAGTELRTQVGNTQQQQLRLEQE
LQQSQQQLADYHQRWQTLTKPLALTLALNDVAALTIWLEQQEQSEQFCQQKLAEYEQLNQ
QHQQAKDMLAQAEQLQQKHQQQLSLVLQRQQDTQQSHQQLVAQHQRQQDELAKMRQSFSD
ALAAVSLSIPETSQQESWLAQREAENQRWHQYQQEQQQLELGQKALETQIENERRHLQEY
VDQLSVLSLQHQQAEILLQQHNQHRHALFGDDNVTEARQRLRQQQQQVELAQQNAATALQ
QAQSQLHLISGELAGLEQQQQQNQQRAATAQTELQQALANSEFIDEAALTAALLSEEERQ
RLQQWQQQLSERQQQANIRLQQANEALEQYLQACPAGVSQTSELTLLQQQSEQLLAQLKA
NTLRQGELRNQLESDAVRRSNQHALFEQIERSQQQYDDWSYLNHLIGSKEGDKFRKFAQG
LTLDHLVYLANNQLSRLHGRYQLQRKTSDALELQVVDTWQADAIRDTRTLSGGESFLVSL
ALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDTALDALDSLNASGKTIGVISHVEAMK
DRIPVQIKVKKINGLGVSRLDNIFRVNQD
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttaagcctgcgtctgaaaaacattaactctctgcaaggcgagtggaagata
gatttcaccgctgagccgtttgccagcaacggattattcgcgatcactggccccactggc
gccggtaaaaccacactgttggatgcaatttgtcttgcgttgtaccaccagactccacgg
ctgaatgtcacgcccagccagaatgaattaatgacccgccatacagcggagtcactggcc
gaagttgagtttgaggtaaaaggcacccgctaccgcgcattctggagccagcgccgcgct
aaaaatagcccagaagggaatctgcaagcccctaaagttgaattggcgctctgcgaagac
ggcaaaattctggcggataaagtacgtgacaaattggatatggtggcggcaatcactggg
ctggattttggccgttttaccaaatccatgatgctgtcgcaggggcaatttgctgcgttc
ctcaatgctgatgccaatgatcgtgcggaattattagaagagttaaccggcaccgacatc
tatgggcggctatctgagcatgtatttgagcaacataagcaggctaagatctcgctggat
gctttacatcagcgtgccagtggcattgaactgctgaatgaagagcagcgcctggctgtg
gcgcaacaaattgatgctcttggcgaacaagaaaagcaactcacctcagagcaacaaacc
aatcagaaacagataaactggctagtcggttggcagcagcagcaaaaaaatctgctggaa
tttcagcaacagcaaaaactcattgagcaagaataccaacaggctcagccggagttgcaa
cgactggcccgtagtgagcccgcagaaaaactacgtcctttgctgcgagaatgttcacgc
agccagcaagatttgcaacaaatacaactgcgtgtcactactctggcccaacaacagcaa
caacttcaggcgcaacttaccccgctggctgaagcactggagcaagccaacttagctcgc
cagcagcaagctaccaaacagcatgagcaagaaacactaattgaacaaaaagtggtgcca
ctggataaccttattacccagcaacagcatctcttggcgcagcttgcgacacagctacag
caactgcgaggtaaagagcaacaaagtaaacaacagctagaactcaatgagcggcaactg
caacaaacccatcaacgcctgcaacaactggctgaatatgcacatattaatgctcaccat
caacattgggaaaaaaatctacctttgtggcgtgagcaattccgtcagttacatatacag
caacaacaatccgttgaaagcgagcaacagttacagcaactggttacgttgctcaacaac
ttgcaacagcaaactgccacactgaacgagcaggataaacagcagcaagcggcattagtg
caagccaacttgcaagcaagcagcatccagcaacaactatcggcacttgagcagttgcac
ccctcggcacagttacgccaccagttgagtgaactccagcaacagcgggcagtgcgacag
caattagcggcattatcccctctagcgcagcaagttcagacacagcacgataaacagcag
caacagttaattagtcagcaacagcagctaaagcaactggaacagcagttagccgaaaaa
cgtcaacgatataaacaacaaaaacagcatctgacggatttggaagcccttctggatcgc
gaaaagcagatagtccgcctagaagcagaaagggccaaactgcaaccaggtgatgcttgc
ccactatgtggcgcagtggatcacccggcgattactgagtatcaagcggtaaaaccatca
gaaactgcggtacgagttgaggcgctgcgccttcaggttgaacaactcttcaccgccgga
acagaattacgtacacaagtaggaaatacccaacagcagcagttgcgtctggaacaagag
ctacaacaaagccagcagcaactggcggattatcaccaacgctggcaaacactgacaaaa
ccgttggcgctgacattggcattaaatgacgtggcggcgttaacaatctggctggaacaa
caggagcagtctgaacagttctgccagcaaaaactggccgaatatgaacaactgaaccag
caacatcaacaagccaaagatatgctggcccaagcagagcaactgcaacaaaagcatcaa
caacagttatcactggtgcttcagcgtcaacaagatacccagcaatcccaccaacaattg
gttgcccaacatcagcgccagcaagatgagttggcaaaaatgcgccaaagtttcagcgat
gctctggcggcagtttcgctatcaatacctgaaacaagtcagcaggaaagttggctggca
caacgcgaagcagaaaatcagcgctggcatcagtatcaacaagagcaacaacaactggaa
cttgggcaaaaagcactggaaacgcagattgaaaatgagcgtcgccacttgcaagaatat
gtcgaccaattatcagtccttagcctgcaacatcaacaagctgaaatcctgctgcaacaa
cacaatcagcatcgccacgccctatttggcgacgacaatgtgaccgaggcacgtcagcga
ctacgccagcaacagcagcaagtagaattagcacaacagaatgcagcgacggccctgcaa
caagctcaatcccaacttcacctgatatccggtgaactggcaggtttagagcagcagcag
caacaaaatcagcagcgcgccgccaccgcccaaactgaattacagcaagcactggcaaac
agtgagttcattgatgaagcagccttaaccgcagcattactaagcgaagaagaaaggcaa
cgtttgcagcaatggcagcaacaattgagcgagcgccagcaacaagccaatatccgacta
caacaagccaatgaagcattggagcaatatctccaagcttgccctgccggtgtgtctcaa
acctctgaattgacactattacagcagcagtcagagcaactactggcacagttaaaagcc
aatacattgcgtcaaggtgaattacgcaatcagctagagagcgacgccgttcgtcgtagc
aatcagcacgcgctgtttgagcaaattgaacgtagccaacaacaatatgatgattggagc
tatctcaatcacttaattggctccaaagaaggcgataaattccgcaagttcgcgcagggt
ctaacactcgaccatttggtctatctggcaaataaccagcttagtcgtttgcatggccgc
tatcagctgcaacgaaaaaccagcgatgcactagagctgcaagtagtggatacctggcag
gcagatgctatacgtgatacccgcacactatctgggggagagagctttttggtcagtttg
gccttagctctggcactatcggatttggtcagccataaaaccagtattgactcactgttc
cttgatgaaggttttggtacgttggatgctgagacactggataccgcactggatgccctg
gatagcctgaatgcgtcgggcaaaaccatcggggttattagccatgttgaggcaatgaaa
gaccgaatcccagtgcaaattaaagtgaaaaaaatcaacgggctgggtgttagccgcctg
gataatatttttagggtaaatcaagactaa
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integrated database retrieval system