Yersinia alsatica: N0H69_21095
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Entry
N0H69_21095 CDS
T08521
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
yas
Yersinia alsatica
Pathway
yas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N0H69_21095 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yas03019
]
N0H69_21095 (rhlB)
Enzymes [BR:
yas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N0H69_21095 (rhlB)
Messenger RNA biogenesis [BR:
yas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N0H69_21095 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
UWM45090
UniProt:
A0ABY5URC3
LinkDB
All DBs
Position
4660252..4661538
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AA seq
428 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQMTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPSVDKRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIQEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLARTRTGNGPRRNSAPRRSGAP
RNNRKRPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttgaccgaacagaagttttccgacttcgccctgcacccgctagtt
gttgaagcccttgaaaacaaagggtttcaatattgtacgcctattcaggcgttagcattg
ccactcaccctatccgggcgtgatgtagcgggtcaggcgcaaacaggaaccggcaagacg
ctggcattcttagcgtctactttccattatttgctttctcacccggcagaagagggtcgc
cagactaatcaaccacgcgcattgattatggcaccaacgcgtgaattagcagtgcaaatt
cactccgatgcagaatcactttcccagatgaccgggctgaaattaggcttggcttatggt
ggtgacggctacgacaaacagcttaaggtgctggaaagtggcgttgatattctgatcggc
accactggccgtttaatcgactacgcaaaacaaaattacattaatcttggcgcaattcag
gttgtggtcttggatgaagcggatcggatgtacgatttaggctttattaaagatatccgc
tggttgttccgccgcatgccttctgttgataagcgcttaaacatgttgttctctgccact
ctctcgtaccgggtacgtgaattggcattcgagcagatgaataacgcagaatatgttgaa
gtggaaccgttacaaaaaaccggccaccgcattcaggaagagctgttctatccttcaaat
gaagaaaaaatgcgtctgcttcagacgttgattgaagaagagtggccagatcgctgcatt
atttttgcgaacacgaaacatcgctgcgaagagatctggggccatttggctgctgatggt
catcgtgtcggtctgttgaccggtgatgtcgcgcagaaaaaacgtctgcgtattttggaa
gatttcactaaaggtgatttggatattctggttgcgaccgatgttgccgcccgtggtctg
catattccactggtgacccatgtcttcaactatgacttaccagatgactgtgaagactat
gttcaccgcattggccgtaccggtcgtgctggcgaaagtggccattccatcagtctggca
tgtgaagagtatgcattaaacttaccggctattgagacctacaccggtcatagcattccg
gtaagcaaatataatagcgatgcgctattaacagatttgccggcgccaaaacgtctggcc
cgtacccgtaccgggaatggcccacgccgtaactctgccccacgccgcagtggtgcacca
cggaataaccgtaagcgaccgagctga
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