Yersinia alsatica: N0H69_21595
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Entry
N0H69_21595 CDS
T08521
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
yas
Yersinia alsatica
Pathway
yas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N0H69_21595 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yas03400
]
N0H69_21595 (mutM)
Enzymes [BR:
yas01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
N0H69_21595 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
N0H69_21595 (mutM)
DNA repair and recombination proteins [BR:
yas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N0H69_21595 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Sugar-bind
Zn_ribbon_6
zf-dskA_traR
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
UWM45178
LinkDB
All DBs
Position
complement(4776585..4777394)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILALSDQPVLSVQRRAKYLL
LELKTGWIIVHLGMSGSLRILSEETEPEKHDHVDLVISNGKILRYTDPRRFGAWLWAKDL
ETSNVLAHLGPEPLSDEFTAEYLLDKSRNKRTVVKQWLMDNKVVVGVGNIYASESLFAAG
ILPERAAGSLTEVETARLVATIKAVLLHSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRQCGQLIEIAKHGQRSTFFCRHCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaaaccagccgacgcgggatcgaaccttatcttgtcggc
cagaccattctctatgcagtggtgagaaatgctcgcttacgctggccggtatccgatgaa
atcctcgcactcagtgaccaacccgtattaagtgttcagcgtcgggcaaaatatttactg
ctagaactgaaaacaggctggattatcgtacatctggggatgtcaggtagcttgcgcatt
ttgtcggaagaaaccgagccggaaaaacatgatcacgtcgatttggtgatcagtaacggt
aaaatactgcgttataccgacccacgccgctttggtgcctggctatgggcgaaagacctt
gaaaccagtaacgtactcgcgcatctagggccagaacctttgagcgatgaattcacggct
gagtatctgcttgataaatcacgcaacaagcgcactgtggttaaacagtggttgatggat
aacaaagtggtggtgggggttggtaatatttacgccagtgaatctttatttgctgccggt
atcttgccagagcgtgctgcaggttcattaaccgaagtagaaactgcacggttagtggcc
acgataaaagcggtgttattgcactctattgagcaagggggtacgacattgcgcgatttt
ttacagtcagatggcaaacccggttattttgctcaagagctacaggtctatgggcgggca
ggtgagccatgccgccaatgtgggcaattgattgaaattgcaaaacatgggcagcgcagc
acattcttttgccgtcactgccagcattaa
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