Ylistrum balloti (Ballot's saucer scallop): 132543160
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Entry
132543160 CDS
T11245
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yba03009
]
132543160
03012 Translation factors [BR:
yba03012
]
132543160
Enzymes [BR:
yba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132543160
5.6.2.5 RNA 5'-3' helicase
132543160
Ribosome biogenesis [BR:
yba03009
]
Eukaryotic type
Other ribosome biogenesis factors
132543160
Translation factors [BR:
yba03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132543160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
ResIII
AAA_16
AAA_22
nSTAND3
Viral_helicase1
AAA
UvrD-helicase
nSTAND_NTPase5
SLFN-g3_helicase
DEAD
NAT10_TcmA_helicase
Flavi_DEAD
ATPase_2
UvrD_C_2
Glyco_tranf_2_3
DnaB_C
NPHP3_N
cobW
ABC_tran
RuvB_N
Znf_XAF1_N
AAA_33
NTPase_1
Motif
Other DBs
NCBI-GeneID:
132543160
NCBI-ProteinID:
XP_060062614
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MEQFTRKHLRLLEKEREAELEETRILTEKLPIKELQRRGVCLLKLCIAGRRTGFYGRIVI
TFEKSRNQHELPSHNFTPGDIAGLSRSSDDQTEDIGSGIITKASKTSICVAFDDSQDLFL
LRDDDSYKLQKLANDVTYKRLKRALHDLQSLTPCPASRLVGVLFGERELTPPYIIKEFTF
INQNLDDSQKEAVRFALSQPELAVIHGPPGTGKTTTVVEVITQAVKLNMKVFVCTPSNIA
VDNLVERLAKNKLKIVRLGHPARVLPHIQKYSLDAILANSEETKLVEDVRKDIDKAWSQM
KKTKDKGEKHALRGEMKFLRKELAQREQAATKEILKRADVVLATLTSASPEGPVKFLDKD
HFQLTVIDECSQAVEVACWIPLLRAPRCVLAGDHMQLPPTILSQEAAKDGLEVTLMERII
DLYHTKVVRMLTTQYRMHQLIMQWSSDQIYHSKLTAHPTVAGHLLSDLEAVNAEEEIASM
PLLLIDTAGCDLSEMDTPEEISKGNEGEADIVCSHVDRLIMTGVKQQEIAVIAPYNLQVE
LLRLRICPNYPDVEIKSVDGFQGREKEAVIITLVRSNRRGEVGFLSEYRRINVAVTRARR
HLAVICDTETVSHNNFLKSLVDYLGSHGEVQTAQDYIDSGIFNNKNIRPEHLDDLLKLNS
VKKSKGSAARPKSSVSKPKQTHSSDSSKTVSAIGSSRDQRNRDSKTHLSDEVITEQKTQK
YREILEKFVANTEVDCMEFPATLTSFERMLVHELAGKLSLTHVSKGEDKERFIVVSKPGG
QVQSKTTKTSSHQLRNETEETKSIEPLEEKSTQQEGKKSDKLVCPHCSKDVIKANFSLHE
IHCSRRECSAKANKKSQGTSAKVTVKQQNGIKKLSPPSATAKIEKVDAADFDGLLAAAQK
LDEVCGFTKCKVKVKTLGQQCEFCMRRFCLSHHIPEIHGCGEVAKAQARSMHVKKGVLYC
SSATKPPPPDPARQAALHRKLDKKLSDLTAQRSKSAKKKNKK
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtttacccgtaaacatttgcgacttctagaaaaggaaagggaggctgaatta
gaagaaacaagaattttgacagagaagttgcccatcaaagagctacagaggagaggggta
tgtcttctaaagctatgcatagcgggacggagaacaggattttatgggagaattgtcatc
acatttgagaagagcagaaatcaacatgagctgccttcccacaatttcacgccaggtgac
attgctgggttaagtcggtcttctgatgaccagacagaagatattggttcaggaatcatc
accaaggccagtaaaacttctatttgtgttgcttttgatgatagccaggatctttttctc
ttaagagatgatgattcatataaactgcagaaactagcaaatgatgtcacttacaagaga
ttaaaacgagctcttcatgatctacaatccctcactccttgtccagccagccgacttgtt
ggagtgttgtttggggaaagggagttaactccaccttatatcattaaagaatttacattc
ataaatcaaaacctggatgactcccaaaaagaggctgtgagatttgccttgtctcagcca
gagttagctgtaattcatggtcctccaggcacaggaaaaacaactacagtcgtggaggtc
attacgcaggctgttaaacttaacatgaaggtatttgtgtgcaccccctcaaacatcgct
gtagacaatctggtggagagacttgccaaaaacaaactgaaaattgtacgacttggacat
cctgcacgagttcttccacacattcagaaatactccctagatgccatcttagcaaacagt
gaggaaactaagttggtagaagatgtacgaaaggatattgataaagcttggtcacagatg
aagaaaactaaagacaaaggagagaagcatgcactgcgtggagaaatgaaattccttcgg
aaagaattggcacagcgtgagcaagcagcaacaaaagagatattaaaacgagcagatgtt
gtcttggcaacactgacatcagcttctccagaaggaccagtcaaatttctggataaagat
cactttcagttaactgtcattgatgaatgttcacaggcagttgaggtggcttgttggatt
cccttactgagggcccctcgatgtgttctagctggggaccacatgcagttacctccaacc
atcctcagtcaggaagcagccaaagacgggctggaagtaaccttgatggaaaggataatt
gacctctatcataccaaagtggtccgcatgctgaccacacagtaccgcatgcaccagcta
atcatgcagtggtcatctgatcaaatctatcacagcaaactgacagctcaccctacagtg
gctggtcatcttctcagtgacttggaggctgtaaatgcagaggaggagatagccagcatg
cccctactgttaattgacacagctggttgtgacttatctgagatggacacacctgaggaa
atatctaagggaaacgaaggagaggcagatatagtctgtagtcatgttgacaggctgatt
atgacaggtgtaaaacagcaggagatagcagtcatagctccctacaacttacaggtggag
ctgttacgcctcagaatctgccctaattatccagatgtggagatcaagtcagtggatggt
tttcaaggacgtgagaaagaagctgtcatcataacactggtcagaagtaacaggagaggt
gaagttggatttctgtcagaatataggagaataaatgtagcagtgaccagagcccggcgc
cacctggcagtgatttgtgacactgagacagtttcacataacaactttctcaagtctttg
gtagattatctgggatcacatggagaggtgcagacagctcaggactacatagattctgga
attttcaacaacaaaaatattcgtcctgaacatcttgatgatctcttgaaattgaactcg
gttaaaaagagtaagggatctgcagccaggccaaaatcatcggtgtccaaacctaaacag
actcacagttctgacagtagtaaaacagtatctgccattggttcttcaagggatcagaga
aacagagacagcaagacacatctaagtgatgaagtgattacagagcagaaaacacagaag
tatagggagatcctagaaaagtttgttgccaatactgaagtggattgtatggagttccca
gctacactcacatcttttgagagaatgctggtgcatgaactagcagggaagctgtctcta
actcatgtcagcaagggagaagataaggagaggttcattgttgtgtccaaacctggtggt
caggttcaatctaagacaacaaagacttctagtcatcagttgagaaatgaaacagaagag
actaaaagtattgaacctttagaggaaaagtcaacgcagcaggagggaaaaaaaagtgac
aagttagtttgtcctcactgtagtaaagatgtcatcaaggccaacttcagcctacatgaa
atccattgttcaagaagagaatgctctgcaaaagcaaataaaaagtctcagggcacttca
gctaaggtcacggtaaaacaacaaaatggtataaaaaagctgtctccaccaagtgctact
gccaaaattgaaaaagtggatgcagctgactttgatggattgctagctgcagctcagaaa
cttgatgaagtttgtggcttcacaaaatgtaaagtgaaagtgaagaccctgggtcaacag
tgtgagttttgtatgagacgtttctgtttgtctcaccatattccggagattcacgggtgt
ggagaggtggctaaggctcaggcacgttctatgcatgttaagaaaggtgttttgtattgt
agcagtgctaccaaaccacctccaccagatcctgcccgacaggctgctctccataggaaa
ctggacaaaaaattgagtgacttgactgcacagcgttcaaaatcagcaaaaaagaaaaat
aaaaaataa
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