Ylistrum balloti (Ballot's saucer scallop): 132543472
Help
Entry
132543472 CDS
T11245
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
yba04121
]
132543472
Enzymes [BR:
yba01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132543472
Ubiquitin system [BR:
yba04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
132543472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
Sina_ZnF
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-TRAF
zf-rbx1
RING_XB3-XBAT31
IBR_1
TRAF3_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
132543472
NCBI-ProteinID:
XP_060062958
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MGFHVEKFVSKISEDKKCGLCQRVLDNPVSTPCGHKFCTGCILPWLMKHGKCPEKCRGLS
PEQLESVLPLRESILNMEVHCEFRERGCTHVMKLCEAEGHSQECDFRPTLCGLDSCDAIL
SLKELSRHQTQDCPYRPVGVCQQGCGLILQHNSSDKHKCLLALRAHIATQDNQINSLELE
MKRVLSKFSKREKSLLLTISNLQQELQYQAAEFQRLLHDWSLQYNQADVYSTPLKLTLWR
LNNSLGFNIMGGFSTEDDDNNNSRKTEDGTEGIVVSKVMEGGSAEKTGLQVNDHIVKVNG
QDLSKSSHEEAVEAFRTAQEPIVVEVLRRVNKNKMKNRSPTMVSIGTQTEEEIYGFNRPP
TPPPPVFPFPASGLYQPSSRRPVAFSASTEMGLTDIEMAHGFEYDDAYFDERGYDMEYEE
VILHRSSNSEKLGLTLCYGSVEEGMTDIFISEVETESVAFKNGQIREGDQILQINGIDVQ
SREQAIKLFSERGTDIRLLLARPAQLQLDDGFMEEQNGVLDDFQMDILEKHHHDNMQIMA
SMLARGHFDEEGGTTDTATTENSLHKHEKDSGVGRTDESLRNEESSEQDVYESEFTNSPA
ATSKFRPNYKHLKDEQHYSDESFLSTEVVDQEGMVQMIPPDVCERFREDLARRCGEMRGE
EMLMRKDSQSSIEQELAILNKEMEDIQLECQELANARMRDQSKAQSPRDQTPYRSPRIVP
RMGTRLEFMKHVQLYDQIDSLGRKDTLPSIKGLTIGGKASSDKGDRDASTTSAYNTGESC
RSTPLTLELNQTSDEGEKGFKNSMLCLAPIPSVPTMTSLSDTEKQTQTPCRSHESSSEDT
FLAANTPSDSVPSGTPLLQQQKNKMGESLQDLYMKYADVMYTNQANLQHTIQIQQKLFQQ
QMDQKRPRNSGPYASSGSGSTHVLPPGGQSPGNATPPGSGEMEWVVKRRPDGTRYITRRP
IRNKMLKERAKKISEERCGMTTDDDAMSELKTGRYWSKEDKKRHIEKAKDHKKRRELMMK
AKMETLKETEEKKEVNVVELGHRKMMKHKGKKVFDDFTTVQEMLAHGSRVPEGKTYNPLL
SVTTV
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgggttttcatgttgagaaatttgtaagtaaaatatcggaggacaagaagtgtggtctg
tgtcaacgtgtattggataacccagtaagtaccccttgtggtcataagttctgtacaggg
tgcatcttaccctggcttatgaagcatgggaagtgtcctgaaaaatgtcgaggcctctct
cccgagcaattagaaagtgtcctccctttacgtgaatctattctaaacatggaagtacac
tgtgaattccgagaacgtggatgtacccatgtaatgaagctctgcgaggctgaaggccat
agtcaggagtgcgacttccgaccaaccctttgtggtcttgacagctgcgatgctattctg
tcactgaaggaactgtctcggcaccagacacaggactgcccctataggcccgtgggtgtc
tgccagcaaggctgtggacttatcttgcaacacaatagttccgacaagcacaaatgcttg
ctggctctaagagcacatatcgcaacccaagacaatcaaataaattctctggaattggaa
atgaagcgagttctttcaaagttttcgaagcgtgaaaagtcgctacttttgacgatttcg
aacctgcagcaggaactacaataccaggctgcagaattccaacgccttctccacgactgg
agtctgcaatataaccaggcagacgtgtattccactcctctcaaacttaccctctggaga
ctcaacaactctcttggctttaacatcatgggaggattttcgactgaagatgacgacaac
aataacagtcgaaaaactgaagatggcacggagggcattgtggtgtcaaaggtcatggaa
ggagggtcagcagagaagactggactacaagtgaatgaccacatagtcaaagtaaatggt
caggatttatccaagtcatcacacgaagaagccgttgaggccttccgcactgcgcaagaa
cccattgtggttgaggttctacgcagggtcaacaaaaataaaatgaaaaatagatctcca
accatggtatccataggaacacaaacagaagaagaaatttacggatttaatcgtccacca
acaccacctcctcccgtctttccatttcctgccagtgggttatatcagccatcgtcaagg
cgaccagtagcattttcagccagtaccgagatgggtctcacagacattgaaatggcccat
ggttttgagtatgatgatgcatattttgatgagcgaggatatgacatggaatatgaggag
gtgattctacatcgatcatcaaacagtgagaagctgggtctgacgttgtgttacggttct
gtggaggaaggcatgacggacattttcatcagtgaggtggaaacagagagtgtagctttc
aaaaatggtcagattcgtgaaggagatcaaatattacagattaatggcattgatgtacag
agccgggaacaagctataaaactattttctgagagaggaacagacattcgattgcttctt
gccagaccagctcagctacagctggatgatgggttcatggaagaacagaatggggttctt
gatgactttcaaatggacattttggaaaaacatcaccatgacaacatgcaaatcatggcc
tccatgttggctaggggtcattttgatgaggaaggtgggacaacagacactgctaccacg
gaaaactccctgcacaaacacgaaaaagatagtggtgtgggacgtacagatgagagttta
aggaatgaagagagttccgaacaggatgtgtacgagtcagagtttaccaactctccagca
gctacatcaaaattccgcccaaattacaagcacctgaaggatgaacagcattatagtgac
gagagcttcctgtcaacagaggttgtggaccaggagggtatggtacagatgattccgccg
gatgtgtgcgagagatttcgtgaggacttggcgcgtagatgtggggagatgcgtggagaa
gagatgttgatgaggaaagactctcaaagtagtatagaacaggagctagctatcctcaac
aaagagatggaggatattcagctcgagtgtcaggaactcgcaaatgctcgcatgcgtgac
cagtccaaagcgcagagtcctcgtgatcaaacaccatatcgtagtcccagaattgtgccc
cgtatgggaacacgtcttgaatttatgaagcatgtgcaattatatgaccaaatagacagt
ctgggtcgaaaggatacactgccctctataaaggggttgacaattggcggtaaagcttcc
tcagataaaggggaccgtgatgcttcgaccacaagtgcttataacactggggagagctgt
cgtagcaccccactcacccttgaacttaatcaaacgtcggatgagggcgagaaaggattc
aaaaactctatgctgtgtttagcccccataccgagtgttcctacaatgacatcgctaagt
gatacagaaaaacaaacacagactccttgtaggtctcatgagagttccagtgaggatacg
tttttagcggcaaatactccctcagactctgtaccttctggtactcccttacttcaacaa
cagaaaaataaaatgggtgaatccctgcaggacttgtacatgaaatacgcagatgtgatg
tatactaaccaagccaacctccagcacaccattcaaattcagcagaaactgtttcaacag
cagatggaccagaaacggccacgtaattctggaccctatgcttcaagtggcagtgggtca
acacatgtactgccacctggtggacagtcccctggaaatgccactccgcctggcagtggg
gaaatggaatgggttgtaaaacgtcgtcccgatggcacacgctatatcacaaggcgacca
atcagaaacaagatgctcaaggaacgagcaaaaaagatttctgaagagcgttgtgggatg
actacagatgatgatgcaatgagtgaattaaagactgggcgatactggtcaaaagaggac
aagaaacggcatatagaaaaagccaaggaccataaaaaacgcagggagcttatgatgaaa
gctaaaatggaaactctaaaagaaactgaagagaaaaaggaggtgaatgtcgtagagtta
ggtcaccgtaaaatgatgaagcacaagggcaagaaagtatttgatgatttcactacagta
caggagatgttagcccatggaagtcgcgtgcctgagggcaaaacatataatcccttactg
tcagtgacaaccgtgtga
DBGET
integrated database retrieval system
